RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 PINX1Q96BK5 328 aaKnown RBP18.18■□□□□ 0.5
PTDSS1-201ENST00000337004 ZNF665Q9H7R5 613 aa18.18■□□□□ 0.5
PTDSS1-201ENST00000337004 CYB5BO43169 146 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 SPANXN5Q5MJ07 72 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 P2RX4Q99571 388 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 PARD6GQ9BYG4 376 aaPredicted RBP18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 MBNL3Q9NUK0 354 aaKnown RBP18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 DOK5Q9P104 306 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 WIPI2Q9Y4P8 454 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 NXPH2O95156 264 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 ZNF726P1Q15940 193 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 WDR86Q86TI4 376 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 HAPLN4Q86UW8 402 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 WDR61Q9GZS3 305 aaKnown RBP18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 TMEM242Q9NWH2 141 aa18.17■□□□□ 0.5
PTDSS1-201ENST00000337004 FAM90A26D6RGX4 464 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 ATXN7O15265 892 aaPredicted RBP18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 ZNF146Q15072 292 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 TMEM41BQ5BJD5 291 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 FGFRL1Q8N441 504 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 DRAM1Q8N682 238 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 OR13D1Q8NGV5 346 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 UBALD1Q8TB05 177 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 RCC1LQ96I51 464 aaKnown RBP18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 CDIPTO14735 213 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 MRGPRGQ86SM5 289 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 GGACTQ9BVM4 153 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 VAX2Q9UIW0 290 aa18.16■□□□□ 0.5
PTDSS1-201ENST00000337004 FREM1Q5H8C1 2179 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 IFNA1P01562 189 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 S100A2P29034 98 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 FGF8P55075 233 aaPredicted RBP18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 OR4C12Q96R67 309 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 R4GN57 208 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 PGA5P0DJD9 388 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 PPP1CBP62140 327 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 OR2J1Q9GZK6 312 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 KCNIP1Q9NZI2 227 aa18.15■□□□□ 0.5
PTDSS1-201ENST00000337004 CLDN34H7C241 214 aa18.14■□□□□ 0.49
PTDSS1-201ENST00000337004 CYB5R3P00387 301 aaPredicted RBP18.14■□□□□ 0.49
PTDSS1-201ENST00000337004 VASH2Q86V25 355 aa18.14■□□□□ 0.49
PTDSS1-201ENST00000337004 MDS2Q8NDY4 140 aa18.14■□□□□ 0.49
PTDSS1-201ENST00000337004 CA5BP1Q8WTZ4 195 aa18.14■□□□□ 0.49
PTDSS1-201ENST00000337004 DEFB127Q9H1M4 99 aa18.14■□□□□ 0.49
PTDSS1-201ENST00000337004 A0A1W2PNU3 283 aaPredicted RBP18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 SMPD2O60906 423 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 C1orf87Q8N0U7 546 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 ZBTB34Q8NCN2 500 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 TAF15Q92804 592 aaKnown RBP eCLIP18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 WDYHV1Q96HA8 205 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 CDH20Q9HBT6 801 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 GAR1Q9NY12 217 aaKnown RBP18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 DOCK10Q96BY6 2186 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BKO60814 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 TRGC2P03986 189 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BJP06899 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 CD46P15529 392 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BOP23527 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BBP33778 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 MPLP40238 635 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BDP58876 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BCP62807 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 SLC38A11Q08AI6 406 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST2H2BEQ16778 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 FIP1L1Q6UN15 594 aaKnown RBP18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 SSX7Q7RTT5 188 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BHQ93079 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 FAM210BQ96KR6 192 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 FER1L6-AS2Q96M78 137 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BNQ99877 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 HIST1H2BMQ99879 126 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 SDF2L1Q9HCN8 221 aa18.13■□□□□ 0.49
PTDSS1-201ENST00000337004 COL27A1Q8IZC6 1860 aaPredicted RBP18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 KMT2EQ8IZD2 1858 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 MAP1LC3B2A6NCE7 125 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 CEBPZOSA8MTT3 80 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 MAP1LC3BQ9GZQ8 125 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 ARRDC1-AS1Q9H2J1 176 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 TGOLN2O43493 480 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 CLDN1O95832 211 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 IGHV2-70P01814 119 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 RND2P52198 227 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 ELLP55199 621 aaPredicted RBP18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 MSMO1Q15800 293 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 FAM180AQ6UWF9 173 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 ZNF645Q8N7E2 425 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 GALMQ96C23 342 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 SLC39A9Q9NUM3 307 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 TIMM9Q9Y5J7 89 aa18.12■□□□□ 0.49
PTDSS1-201ENST00000337004 IFITM10A6NMD0 228 aa18.11■□□□□ 0.49
PTDSS1-201ENST00000337004 SEC14L6B5MCN3 397 aa18.11■□□□□ 0.49
PTDSS1-201ENST00000337004 CELA3BP08861 270 aa18.11■□□□□ 0.49
PTDSS1-201ENST00000337004 RAC2P15153 192 aa18.11■□□□□ 0.49
PTDSS1-201ENST00000337004 UBE2NP61088 152 aaKnown RBP18.11■□□□□ 0.49
PTDSS1-201ENST00000337004 NKX6-1P78426 367 aaPredicted RBP18.11■□□□□ 0.49
PTDSS1-201ENST00000337004 TNFRSF9Q07011 255 aa18.11■□□□□ 0.49
PTDSS1-201ENST00000337004 PMS2P11Q13670 270 aa18.11■□□□□ 0.49
PTDSS1-201ENST00000337004 OR8G2PQ6IF36 304 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms