RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SPACA1Q9HBV2 294 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 C19orf12Q9NSK7 152 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 PROCRQ9UNN8 238 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 M0R036 132 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 TAAR5O14804 337 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 RBMXL2O75526 392 aaKnown RBP7.44□□□□□ -1.22
SNCA-201ENST00000336904 HBZP02008 142 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 CD55P08174 381 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 GCH1P30793 250 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 P2RY1P47900 373 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 PAX9P55771 341 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 EDDM3BP56851 147 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 ERVK11-1P61568 191 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 ZNF474Q6S9Z5 364 aaPredicted RBP7.44□□□□□ -1.22
SNCA-201ENST00000336904 UBAC2Q8NBM4 344 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 SNRNP40Q96DI7 357 aaKnown RBP7.44□□□□□ -1.22
SNCA-201ENST00000336904 TMEM56Q96MV1 263 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 AIFM2Q9BRQ8 373 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 TMEM56-RWDD3S4R434 201 aa7.44□□□□□ -1.22
SNCA-201ENST00000336904 PTPRQQ9UMZ3 2332 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 PRR33A8MZF0 331 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 ARG1P05089 322 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 RAC2P15153 192 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 VDAC1P21796 283 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 IL13RA2Q14627 380 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 ZNF585BQ52M93 769 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 PRR30Q53SZ7 412 aaPredicted RBP7.43□□□□□ -1.22
SNCA-201ENST00000336904 BEND4Q6ZU67 534 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 THNSL2Q86YJ6 484 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 ZADH2Q8N4Q0 377 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 OR8G5Q8NG78 346 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 ZDHHC16Q969W1 377 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 PKIBQ9C010 78 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 RPS10P5Q9NQ39 176 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM212BQ9NTI7 297 aaPredicted RBP7.43□□□□□ -1.22
SNCA-201ENST00000336904 CACFD1Q9UGQ2 172 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 PSG11Q9UQ72 335 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 POLDIP2Q9Y2S7 368 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A10PA6NDY2 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A18PA6NE21 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A16PA6NEW6 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A20PA6NIJ5 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A8PA6NJQ4 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A7PA6NKC0 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 PCP4L1A6NKN8 68 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A22PA8MWA6 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A12PA8MX19 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A5PA8MXJ8 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A23PA8MXZ1 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 IQCF6A8MYZ5 107 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 IGKV3-15P01624 115 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A15PP0C7V4 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A13PP0C7W8 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A14PP0C7W9 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM90A24PP0C7X0 464 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 PVALBP20472 110 aaPredicted RBP7.43□□□□□ -1.22
SNCA-201ENST00000336904 ELLP55199 621 aaPredicted RBP7.43□□□□□ -1.22
SNCA-201ENST00000336904 GUK1Q16774 197 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 Q3ZCU0 254 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 KRBOX4Q5JUW0 171 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 EIF5AL1Q6IS14 154 aaKnown RBP7.43□□□□□ -1.22
SNCA-201ENST00000336904 BHLHA15Q7RTS1 189 aaPredicted RBP7.43□□□□□ -1.22
SNCA-201ENST00000336904 MOGAT3Q86VF5 341 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 CD177Q8N6Q3 437 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 ZNRD1Q9P1U0 126 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 CLN8Q9UBY8 286 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 FAM215AQ9Y5M1 114 aa7.43□□□□□ -1.22
SNCA-201ENST00000336904 PUS1Q9Y606 427 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNCA-201ENST00000336904 C17orf98A8MV24 154 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 H0Y980 276 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 S1PR2O95136 353 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 HEXAP06865 529 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 SPP1P10451 314 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 CBR1P16152 277 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 INO80CQ6PI98 192 aaPredicted RBP7.42□□□□□ -1.22
SNCA-201ENST00000336904 SFT2D1Q8WV19 159 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 CLCC1Q96S66 551 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 PLK3Q9H4B4 646 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 KCNJ16Q9NPI9 418 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 LYRM2Q9NU23 88 aaPredicted RBP7.42□□□□□ -1.22
SNCA-201ENST00000336904 DSCAMO60469 2012 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 AKAP6Q13023 2319 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 AQP7O14520 342 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 DANCRP0C864 163 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 EIF2S3P41091 472 aaKnown RBP7.42□□□□□ -1.22
SNCA-201ENST00000336904 OR2B8PP59922 312 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 ACP7Q6ZNF0 438 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 CLRN3Q8NCR9 226 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 TCTEX1D2Q8WW35 142 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 OPA3Q9H6K4 179 aa7.42□□□□□ -1.22
SNCA-201ENST00000336904 GAPDHP04406 335 aaKnown RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 SNCAP37840 140 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 AKR1D1P51857 326 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 EIF5AP63241 154 aaKnown RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 GUSBP1Q15486 140 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 LCN15Q6UWW0 184 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 IL34Q6ZMJ4 242 aa7.41□□□□□ -1.22
SNCA-201ENST00000336904 CISD2Q8N5K1 135 aaKnown RBP7.41□□□□□ -1.22
SNCA-201ENST00000336904 OR5D13Q8NGL4 314 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms