RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PSMB3P49720 205 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 ASCL4Q6XD76 172 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 OR5D13Q8NGL4 314 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 OR2T10Q8NGZ9 312 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 MBD3L1Q8WWY6 194 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 ACY3Q96HD9 319 aa11.74□□□□□ -0.53
SYNE3-201ENST00000334258 UBE2L5PA0A1B0GUS4 154 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 C10orf142B7Z368 130 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 TNFSF11O14788 317 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 SYNGR2O43760 224 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 VAMP5O95183 116 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 CRYGSP22914 178 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 FAM3BP58499 235 aaPredicted RBP11.73□□□□□ -0.53
SYNE3-201ENST00000334258 HIST1H3AP68431 136 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 CYP2G1PQ6ZSU1 146 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 ADGRG7Q96K78 797 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 SLC25A22Q9H936 323 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 FKBP11Q9NYL4 201 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 RP1L1Q8IWN7 2480 aaPredicted RBP11.73□□□□□ -0.53
SYNE3-201ENST00000334258 KIR2DS1A0A191URI9 304 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 IFNL4K9M1U5 179 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
SYNE3-201ENST00000334258 SPINK2P20155 84 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 BCL3P20749 454 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 KIR2DS4P43632 304 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 RPL23P62829 140 aaKnown RBP11.73□□□□□ -0.53
SYNE3-201ENST00000334258 GNB2P62879 340 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 ARL16Q0P5N6 197 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 KIR2DS1Q14954 304 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 CST9LP1Q5W188 147 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
SYNE3-201ENST00000334258 PLA2G3Q9NZ20 509 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 SEMA5BQ9P283 1151 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 ESPL1Q14674 2120 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 KIAA2026Q5HYC2 2103 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF816-ZNF321PA0A0X1KG74 233 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 A0A1W2PQM1 296 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 H0Y980 276 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 LAMTOR5O43504 91 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 SYNGR3O43761 229 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 CHRNA7P36544 502 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 PLA2G5P39877 138 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 CCL7P80098 99 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 PRSS8Q16651 343 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 C1orf185Q5T7R7 199 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 OR4C12Q96R67 309 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 NCOR1P1Q9H4R4 102 aa11.73□□□□□ -0.53
SYNE3-201ENST00000334258 ERRFI1Q9UJM3 462 aaPredicted RBP11.73□□□□□ -0.53
SYNE3-201ENST00000334258 IGLV3-32A0A0A0MS00 114 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 CLEC18AA5D8T8 446 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 KBTBD11O94819 623 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 HRASP01112 189 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 GLB1P16278 677 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 FKBP2P26885 142 aaKnown RBP11.72□□□□□ -0.53
SYNE3-201ENST00000334258 OR5I1Q13606 314 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 HERPUD1Q15011 391 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 TMEM41BQ5BJD5 291 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 RHBDD2Q6NTF9 364 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 Q6ZRM9 215 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 Q6ZSR3 168 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 C17orf82Q86X59 251 aaPredicted RBP11.72□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 CLEC18CQ8NCF0 446 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 TMEM170AQ8WVE7 144 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 PARD6AQ9NPB6 346 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 IL36RNQ9UBH0 155 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 ARHGAP21Q5T5U3 1957 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 DIDO1Q9BTC0 2240 aaKnown RBP11.72□□□□□ -0.53
SYNE3-201ENST00000334258 TMEM210A6NLX4 147 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 SMPD2O60906 423 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 CST2P09228 141 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 SERF2P84101 59 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 ACOT6Q3I5F7 207 aaPredicted RBP11.72□□□□□ -0.53
SYNE3-201ENST00000334258 DCAF10Q5QP82 559 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 ZNF468Q5VIY5 522 aaPredicted RBP11.72□□□□□ -0.53
SYNE3-201ENST00000334258 BTNL3Q6UXE8 466 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 TGIF2LYQ8IUE0 185 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 PINX1Q96BK5 328 aaKnown RBP11.72□□□□□ -0.53
SYNE3-201ENST00000334258 SGCZQ96LD1 299 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 PARLQ9H300 379 aa11.72□□□□□ -0.53
SYNE3-201ENST00000334258 AURKAIP1Q9NWT8 199 aaPredicted RBP11.72□□□□□ -0.53
SYNE3-201ENST00000334258 DSPP15924 2871 aaKnown RBP11.72□□□□□ -0.53
SYNE3-201ENST00000334258 HS3ST1O14792 307 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 CCKARP32238 428 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 TRIM61Q5EBN2 209 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 DNASE2BQ8WZ79 361 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 RDH5Q92781 318 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 CLDN23Q96B33 292 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 HIPK2Q9H2X6 1198 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 IL36GQ9NZH8 169 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 SCRG1O75711 98 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 SELEP16581 610 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 OR3A1P47881 315 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 ERVFC1-1P60608 527 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 PSG4Q00888 419 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 GAGE1Q13065 139 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 Q5PR19 223 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 HS3ST6Q96QI5 342 aa11.71□□□□□ -0.53
SYNE3-201ENST00000334258 DNAJC4Q9NNZ3 241 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms