RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ZNF436Q9C0F3 470 aaPredicted RBP13.53□□□□□ -0.24
SHOX-201ENST00000334060 HIF1ANQ9NWT6 349 aa13.53□□□□□ -0.24
SHOX-201ENST00000334060 RDH8Q9NYR8 311 aa13.53□□□□□ -0.24
SHOX-201ENST00000334060 MTFP1Q9UDX5 166 aa13.53□□□□□ -0.24
SHOX-201ENST00000334060 LINC00312Q9Y6C7 94 aa13.53□□□□□ -0.24
SHOX-201ENST00000334060 FAM25EA8MYX2 175 aa13.52□□□□□ -0.24
SHOX-201ENST00000334060 SLC31A2O15432 143 aa13.52□□□□□ -0.24
SHOX-201ENST00000334060 TGFAP01135 160 aa13.52□□□□□ -0.24
SHOX-201ENST00000334060 HLA-DRB3P79483 266 aa13.52□□□□□ -0.24
SHOX-201ENST00000334060 FLI1Q01543 452 aaPredicted RBP13.52□□□□□ -0.24
SHOX-201ENST00000334060 C8orf46Q8TAG6 207 aa13.52□□□□□ -0.24
SHOX-201ENST00000334060 OR51J1Q9H342 316 aa13.52□□□□□ -0.24
SHOX-201ENST00000334060 MXRA5Q9NR99 2828 aa13.52□□□□□ -0.24
SHOX-201ENST00000334060 TRBV6-6A0A0A6YYG2 114 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 A0A0A6YYJ9 748 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 CTDSPLO15194 276 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 PRAF2O60831 178 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 HRH1P35367 487 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 PPP1CCP36873 323 aaKnown RBP13.52□□□□□ -0.25
SHOX-201ENST00000334060 KCNJ3P48549 501 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 NPY4RP50391 375 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 FCN2Q15485 313 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 FAM189A2Q15884 450 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 LINC00518Q8N0U6 118 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 FCAMRQ8WWV6 532 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 ZNF714Q96N38 554 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 IFT46Q9NQC8 304 aa13.52□□□□□ -0.25
SHOX-201ENST00000334060 TRGV10A0A0A0MS01 117 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 KBTBD11-OT1A0A1B0GTJ5 212 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 hADV38S2A0JD32 116 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 GSTZ1O43708 216 aaPredicted RBP13.51□□□□□ -0.25
SHOX-201ENST00000334060 ZNF728P0DKX0 622 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 MMP9P14780 707 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 NFYAP23511 347 aaPredicted RBP13.51□□□□□ -0.25
SHOX-201ENST00000334060 NFYBP25208 207 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 ZNF134P52741 427 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 LOXL3P58215 753 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 HCP5Q6MZN7 132 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 IL17RELQ6ZVW7 336 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 Q71RC1 249 aaPredicted RBP13.51□□□□□ -0.25
SHOX-201ENST00000334060 GLCCI1Q86VQ1 547 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 C1orf159Q96HA4 380 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 TBX15Q96SF7 602 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 PCGF1Q9BSM1 259 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 ANXA10Q9UJ72 324 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 INSIG2Q9Y5U4 225 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 KIR2DS1A0A191URI9 304 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 TRDCB7Z8K6 153 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 CA11O75493 328 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 DTYMKP23919 212 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 CR1LQ2VPA4 569 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 LDLRAD2Q5SZI1 272 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 EIF4E3Q8N5X7 224 aaKnown RBP13.51□□□□□ -0.25
SHOX-201ENST00000334060 OR56B4Q8NH76 319 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 CORO2AQ92828 525 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 SUCNR1Q9BXA5 334 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 SIRPDQ9H106 197 aa13.51□□□□□ -0.25
SHOX-201ENST00000334060 NPIPB11E5RHQ5 1161 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 FOXH1O75593 365 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 SULT1A3P0DMM9 295 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 SULT1A4P0DMN0 295 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 COX7A1P24310 79 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 GNG10P50151 68 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 PITPNAQ00169 270 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 DHODHQ02127 395 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 KLF9Q13886 244 aaPredicted RBP13.5□□□□□ -0.25
SHOX-201ENST00000334060 FAHD2BQ6P2I3 314 aaPredicted RBP13.5□□□□□ -0.25
SHOX-201ENST00000334060 VMO1Q7Z5L0 202 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.5□□□□□ -0.25
SHOX-201ENST00000334060 TNFRSF14Q92956 283 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 TMEM186Q96B77 213 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 FAHD2AQ96GK7 314 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 OPN4Q9UHM6 478 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 PFDN2Q9UHV9 154 aa13.5□□□□□ -0.25
SHOX-201ENST00000334060 TRBV23-1A0A0A0MS06 115 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 B4DSR2 109 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 RBBP9O75884 186 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 LIPFP07098 398 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 IGHV1-8P0DP01 117 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 DVL1P1P54792 670 aaPredicted RBP13.49□□□□□ -0.25
SHOX-201ENST00000334060 MEF2CQ06413 473 aaPredicted RBP13.49□□□□□ -0.25
SHOX-201ENST00000334060 ZNF565Q8N9K5 539 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 LINC01356Q8N9X3 169 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 MRGPRFQ96AM1 343 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 GPHA2Q96T91 129 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 GSX1Q9H4S2 264 aaPredicted RBP13.49□□□□□ -0.25
SHOX-201ENST00000334060 SCPEP1Q9HB40 452 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 ZNF286AQ9HBT8 521 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 OR6C3Q9NZP0 311 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 POLR3KQ9Y2Y1 108 aaPredicted RBP13.49□□□□□ -0.25
SHOX-201ENST00000334060 TEP1Q99973 2627 aaKnown RBP13.49□□□□□ -0.25
SHOX-201ENST00000334060 F8P00451 2351 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 MFSD2BA6NFX1 497 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 C17orf98A8MV24 154 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 SCO1O75880 301 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 OR4C16Q8NGL9 310 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 SLC6A7Q99884 636 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 PRELID3BQ9Y3B1 194 aa13.49□□□□□ -0.25
SHOX-201ENST00000334060 IGKV1D-13A0A0B4J2D9 117 aa13.48□□□□□ -0.25
SHOX-201ENST00000334060 ANKRD20A5PA0PJZ0 165 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms