RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 LYPD6BQ8NI32 183 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 GPR146Q96CH1 333 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 LUZP4Q9P127 313 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 A0A1B0GU03 582 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 A0A1B0GWJ7 208 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 WRBO00258 174 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 AGPAT2O15120 278 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 PITX3O75364 302 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 PTBP3O95758 552 aaKnown RBP14.63□□□□□ -0.07
DDX28-201ENST00000332395 OMGP23515 440 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 AESQ08117 197 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 CLINT1Q14677 625 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 SLC35E4Q6ICL7 350 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 ZNF474Q6S9Z5 364 aaPredicted RBP14.63□□□□□ -0.07
DDX28-201ENST00000332395 PRR7Q8TB68 274 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 SEBOXQ9HB31 216 aaPredicted RBP14.63□□□□□ -0.07
DDX28-201ENST00000332395 RNF115Q9Y4L5 304 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 AKAP13Q12802 2813 aa14.63□□□□□ -0.07
DDX28-201ENST00000332395 C12orf77C9JDV5 145 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 CHST1O43916 411 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 IGKV1-39P01597 117 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 TFF1P04155 84 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 IGKV1D-39P04432 117 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 SLC25A6P12236 298 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 OR3A1P47881 315 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 ZNF83P51522 516 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 ZNF266Q14584 549 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 EIF2S3LQ2VIR3 472 aaKnown RBP14.62□□□□□ -0.07
DDX28-201ENST00000332395 SMIM21Q3B7S5 101 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 RNF212Q495C1 297 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 C1orf185Q5T7R7 199 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 ALKBH2Q6NS38 261 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 OR1L1Q8NH94 360 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 RNASE11Q8TAA1 199 aaKnown RBP14.62□□□□□ -0.07
DDX28-201ENST00000332395 SNIP1Q8TAD8 396 aaKnown RBP14.62□□□□□ -0.07
DDX28-201ENST00000332395 S100PBPQ96BU1 408 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 COQ2Q96H96 371 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 LIN7CQ9NUP9 197 aaKnown RBP14.62□□□□□ -0.07
DDX28-201ENST00000332395 WASF3Q9UPY6 502 aa14.62□□□□□ -0.07
DDX28-201ENST00000332395 TIMM23BQ5SRD1 257 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 ODF3L1Q8IXM7 274 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 DRAM1Q8N682 238 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 HIST1H2BAQ96A08 127 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 GALMQ96C23 342 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 C14orf79Q96F83 325 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 KIAA2026Q5HYC2 2103 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 HEATR1Q9H583 2144 aaKnown RBP14.61□□□□□ -0.07
DDX28-201ENST00000332395 OOEPA6NGQ2 149 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 FAM157AC9JC47 383 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 CRYABP02511 175 aaKnown RBP14.61□□□□□ -0.07
DDX28-201ENST00000332395 ZNF16P17020 682 aaPredicted RBP14.61□□□□□ -0.07
DDX28-201ENST00000332395 MSMPQ1L6U9 139 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 TMEM171Q8WVE6 324 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 LSM10Q969L4 123 aaKnown RBP14.61□□□□□ -0.07
DDX28-201ENST00000332395 CLCC1Q96S66 551 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 CACFD1Q9UGQ2 172 aa14.61□□□□□ -0.07
DDX28-201ENST00000332395 C9JQL5 133 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 IFNL4K9M1U5 179 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 M0R1B8 84 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 CST7O76096 145 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 GABRA2P47869 451 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 CAMLGP49069 296 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 FHITP49789 147 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 RAB5CP51148 216 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 PAX9P55771 341 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 COL10A1Q03692 680 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 BAXQ07812 192 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 MZT1Q08AG7 82 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 ZNF616Q08AN1 781 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 IZUMO4Q1ZYL8 232 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 ZNF585BQ52M93 769 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 Q6ZRM9 215 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 OR2Z1Q8NG97 314 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 OR5C1Q8NGR4 320 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 METRNQ9UJH8 293 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 TRAV20A0A0B4J274 112 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 KIAA1324LA8MWY0 1029 aaPredicted RBP14.6□□□□□ -0.07
DDX28-201ENST00000332395 C1QL1O75973 258 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 TSPAN15O95858 294 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 S100A6P06703 90 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 IL2RGP31785 369 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 TIMP3P35625 211 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 MIDNQ504T8 468 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 LRP11Q86VZ4 500 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 LRRC29Q8WV35 223 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 NIT2Q9NQR4 276 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 DUSP13Q9UII6 198 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 MGAQ8IWI9 3026 aa14.6□□□□□ -0.07
DDX28-201ENST00000332395 IGKV1-5P01602 117 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 HBZP02008 142 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 PRH1P02810 166 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 AGAP20933 346 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 CD80P33681 288 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 DYNLT3P51808 116 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 ZNF561Q8N587 486 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 TCEAL7Q9BRU2 100 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 OR51M1Q9H341 326 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 CACNG5Q9UF02 275 aa14.59□□□□□ -0.07
DDX28-201ENST00000332395 STRAPQ9Y3F4 350 aaKnown RBP14.59□□□□□ -0.07
DDX28-201ENST00000332395 CD200P41217 278 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms