RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 SLC39A9Q9NUM3 307 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 MRPS18CQ9Y3D5 142 aaKnown RBP15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 TP53I11O14683 189 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 GYPAP02724 150 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 LCATP04180 440 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 SLC25A6P12236 298 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 PRDX4Q13162 271 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 MRPL14Q6P1L8 145 aaKnown RBP15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 WDR61Q9GZS3 305 aaKnown RBP15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 TTC28Q96AY4 2481 aa15.43■□□□□ 0.06
CLSTN3-202ENST00000331148 HPRT1P00492 218 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 F2RP25116 425 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 WNT5AP41221 380 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 PSMB3P49720 205 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 FAM69BQ5VUD6 431 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 PLCXD3Q63HM9 321 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 ZNF837Q96EG3 531 aaPredicted RBP15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 PSENENQ9NZ42 101 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 IGHV3-15A0A0B4J1V0 119 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 ZNF705FA8MVS1 300 aaPredicted RBP15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 SYNGR3O43761 229 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 IGKV1D-33P01593 117 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 IGKV1-33P01594 117 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 ZNF705DP0CH99 300 aaPredicted RBP15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 ZNF705BP0CI00 300 aaPredicted RBP15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 PCP4P48539 62 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 HBG1P69891 147 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 HBG2P69892 147 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 KCNIP4Q6PIL6 250 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 TMEM256Q8N2U0 113 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 MS4A10Q96PG2 267 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 TBX15Q96SF7 602 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 ULBP2Q9BZM5 246 aa15.42■□□□□ 0.06
CLSTN3-202ENST00000331148 IGKV1-6A0A0C4DH72 117 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 SYNGR2O43760 224 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 NAPSAO96009 420 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 CYC1P08574 325 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 IRF2P14316 349 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 RPL15P61313 204 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 TESK1Q15569 626 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 SRSF7Q16629 238 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 FAM27BQ5VT28 67 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 Q6ZRM9 215 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 CALHM1Q8IU99 346 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 RPP25LQ8N5L8 163 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 PARD6GQ9BYG4 376 aaPredicted RBP15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 WDR54Q9H977 334 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 A0A1B0GUS0 222 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 NPIPA2E9PIF3 369 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 NPIPA3F8WFD2 350 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 IL3RAP26951 378 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 LCN2P80188 198 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 MRPS11P82912 194 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 ZNF611Q8N823 705 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 ZCCHC14Q8WYQ9 949 aaKnown RBP15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 OR4C12Q96R67 309 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 PLA2G3Q9NZ20 509 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 CACNG5Q9UF02 275 aa15.41■□□□□ 0.06
CLSTN3-202ENST00000331148 GPR179Q6PRD1 2367 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 LILRA1O75019 489 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 SERPINE2P07093 398 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 PLA2G5P39877 138 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 OR4F5Q8NH21 305 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 OR51H1Q8NH63 302 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 OR1F12Q8NHA8 337 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 TAF15Q92804 592 aaKnown RBP eCLIP15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 SDSLQ96GA7 329 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 OR4F4Q96R69 305 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 IMMP2LQ96T52 175 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 C19orf25Q9UFG5 118 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 UBE2L5PA0A1B0GUS4 154 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 hCG_38984A0A1B0GV85 526 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 HMGB3O15347 200 aaKnown RBP15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 NUPR1O60356 82 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 PSG2P11465 335 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 ARSJQ5FYB0 599 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 GATAD1Q8WUU5 269 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 PIGCQ92535 297 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 RASL10BQ96S79 203 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 DIRC2Q96SL1 478 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 OPN3Q9H1Y3 402 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 LPAR2Q9HBW0 351 aa15.4■□□□□ 0.06
CLSTN3-202ENST00000331148 LRP11Q86VZ4 500 aa15.39■□□□□ 0.05
CLSTN3-202ENST00000331148 UCN2Q96RP3 112 aa15.39■□□□□ 0.05
CLSTN3-202ENST00000331148 C20orf144Q9BQM9 153 aa15.39■□□□□ 0.05
CLSTN3-202ENST00000331148 SLC25A22Q9H936 323 aa15.39■□□□□ 0.05
CLSTN3-202ENST00000331148 TRAPPC1Q9Y5R8 145 aa15.39■□□□□ 0.05
CLSTN3-202ENST00000331148 CHD3Q12873 2000 aaKnown RBP15.39■□□□□ 0.05
CLSTN3-202ENST00000331148 KIR2DS1A0A191URI9 304 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 KIR2DS4P43632 304 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 KIR2DS1Q14954 304 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM78BQ5VT40 261 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FADS6Q8N9I5 356 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 MIEN1Q9BRT3 115 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 STRADBQ9C0K7 418 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 TMEM9BQ9NQ34 198 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 COL27A1Q8IZC6 1860 aaPredicted RBP15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A10PA6NDY2 464 aa15.38■□□□□ 0.05
CLSTN3-202ENST00000331148 FAM90A18PA6NE21 464 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms