RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 H0YIZ8 118 aa16.37■□□□□ 0.21
NPLOC4-201ENST00000331134 NPBWR2P48146 333 aa16.37■□□□□ 0.21
NPLOC4-201ENST00000331134 HINT1P49773 126 aaPredicted RBP16.37■□□□□ 0.21
NPLOC4-201ENST00000331134 MOB3BQ86TA1 216 aa16.37■□□□□ 0.21
NPLOC4-201ENST00000331134 ABHD14BQ96IU4 210 aa16.37■□□□□ 0.21
NPLOC4-201ENST00000331134 PHF3Q92576 2039 aaKnown RBP16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 RAMP1O60894 148 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 SRSF10O75494 262 aaKnown RBP16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 MFAP2P55001 183 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 LINC00469Q8N7U9 141 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 GPR146Q96CH1 333 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 C10orf35Q96D05 121 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 TRAV38-1A0A0B4J264 116 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 SERF2P84101 59 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 FAM27BQ5VT28 67 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 WDR73Q6P4I2 378 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 NAGKQ9UJ70 344 aa16.36■□□□□ 0.21
NPLOC4-201ENST00000331134 SOD3P08294 240 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 TEX30Q5JUR7 227 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 SLC23A3Q6PIS1 610 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 TP53RKQ96S44 253 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 A0A0U1RQV5 110 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 J3QR89 54 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 HAND1O96004 215 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 WNT5AP41221 380 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 SHISA5Q8N114 240 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 RAB24Q969Q5 203 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 PMS2P1A4D2B8 440 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 SYNGR1O43759 233 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 MRPS11P82912 194 aaKnown RBP16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 RNF2Q99496 336 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 CACNA1BQ00975 2339 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 ARID2Q68CP9 1835 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 MAGEA5P43359 124 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 ZP4Q12836 540 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 DHRS13Q6UX07 377 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 ANGPTL4Q9BY76 406 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 ZDHHC8Q9ULC8 765 aa16.35■□□□□ 0.21
NPLOC4-201ENST00000331134 NPIPB9F8W1W9 429 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 J3QT63 122 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 SIAH2O43255 324 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 IGFBP7Q16270 282 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 CPEB3Q8NE35 698 aaKnown RBP16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 ADIPOR1Q96A54 375 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 GFI1Q99684 422 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 RNF126Q9BV68 326 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 TGFBR3LH3BV60 316 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 M0QZK8 103 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 GGCTO75223 188 aaKnown RBP16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 MEOX1P50221 254 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 RPS23P62266 143 aaKnown RBP16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 IL11RAQ14626 422 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 CEBPEQ15744 281 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 ATOH7Q8N100 152 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 ZADH2Q8N4Q0 377 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 CADM4Q8NFZ8 388 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 TAF15Q92804 592 aaKnown RBP eCLIP16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 MOB3AQ96BX8 217 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 SIPA1L1O43166 1804 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 CYC1P08574 325 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 BIVMQ86UB2 503 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 PAPPA2Q9BXP8 1791 aa16.34■□□□□ 0.21
NPLOC4-201ENST00000331134 LIFP15018 202 aa16.33■□□□□ 0.21
NPLOC4-201ENST00000331134 OR2J1Q9GZK6 312 aa16.33■□□□□ 0.21
NPLOC4-201ENST00000331134 RAB29O14966 203 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 SUCLG1P53597 346 aaKnown RBP16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 COL5A1-AS1Q5SY13 56 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 FDX2Q6P4F2 183 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 OR2Y1Q8NGV0 311 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 FLYWCH2Q96CP2 140 aaKnown RBP16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 LRRC3CA6NJW4 275 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 PRF1P14222 555 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 EPHA8P29322 1005 aaPredicted RBP16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 RTP5Q14D33 572 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 OR8I2Q8N0Y5 310 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 OR5A2Q8NGI9 324 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 OR4A4PQ8NGN8 299 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 FAM87AP0C7U9 286 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 OTX1P32242 354 aaPredicted RBP16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 SLC25A47Q6Q0C1 308 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 ST6GALNAC3Q8NDV1 305 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 OR52L2PQ8NGH6 319 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 TMEM56Q96MV1 263 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 SF3B5Q9BWJ5 86 aaKnown RBP16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 GSX1Q9H4S2 264 aaPredicted RBP16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 RNF122Q9H9V4 155 aa16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 YTHDF2Q9Y5A9 579 aaKnown RBP16.33■□□□□ 0.2
NPLOC4-201ENST00000331134 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 PGLYRP1O75594 196 aaPredicted RBP16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 AGFG2O95081 481 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 CD1BP29016 333 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 TMEM187Q14656 261 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 DEFB109BQ30KR1 87 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 FAM216AQ8WUB2 273 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 ARRDC1-AS1Q9H2J1 176 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 COL6A6A6NMZ7 2263 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 IGHV3-21A0A0B4J1V1 117 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 IGSF23A1L1A6 192 aa16.32■□□□□ 0.2
NPLOC4-201ENST00000331134 PDE6DO43924 150 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms