RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 P2RX3P56373 397 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 HTD2P86397 168 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 EIF4EBP1Q13541 118 aaPredicted RBP14.11□□□□□ -0.15
DDX41-201ENST00000330503 MST1LQ2TV78 715 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 ZNF585BQ52M93 769 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 ZNF561Q8N587 486 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 DMBX1Q8NFW5 382 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 GAFA1Q96PS6 74 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 ST8SIA3O43173 380 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 SPINT2O43291 252 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 CGB3P0DN86 165 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 CGB7P0DN87 165 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 SFTPCP11686 197 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 TNFRSF1AP19438 455 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 TEX36Q5VZQ5 186 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 ZNF645Q8N7E2 425 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 STOML3Q8TAV4 291 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 CCL13Q99616 98 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 NCOR1P1Q9H4R4 102 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 C11orf1Q9H5F2 150 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 COQ3Q9NZJ6 369 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 NDRG3Q9UGV2 375 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 POMT1Q9Y6A1 747 aa14.1□□□□□ -0.15
DDX41-201ENST00000330503 A0A0G2JRQ6 117 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 DEFB108AA8MXU0 73 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 E5RGE8 158 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 SIAH2O43255 324 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 GYPAP02724 150 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 CD3EP07766 207 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 ZNF788Q6ZQV5 615 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 GPR146Q96CH1 333 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 OR2D2Q9H210 308 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 RCL1Q9Y2P8 373 aaKnown RBP14.09□□□□□ -0.15
DDX41-201ENST00000330503 NSG2Q9Y328 171 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 CACNA1AO00555 2505 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 ADGRG4Q8IZF6 3080 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 SERPINE2P07093 398 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 IRF2P14316 349 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 CXorf66Q5JRM2 361 aaPredicted RBP14.09□□□□□ -0.15
DDX41-201ENST00000330503 FAM74A1Q5RGS3 127 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 ZBTB34Q8NCN2 500 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 NINJ1Q92982 152 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 BSCL2Q96G97 398 aaPredicted RBP14.09□□□□□ -0.15
DDX41-201ENST00000330503 CXorf58Q96LI9 332 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 PLEKHA2Q9HB19 425 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 ZFP57Q9NU63 452 aa14.09□□□□□ -0.15
DDX41-201ENST00000330503 RAI1Q7Z5J4 1906 aaPredicted RBP14.09□□□□□ -0.15
DDX41-201ENST00000330503 SMG1Q96Q15 3661 aaKnown RBP14.09□□□□□ -0.15
DDX41-201ENST00000330503 RRASP10301 218 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 MUC1P15941 1255 aaPredicted RBP14.08□□□□□ -0.16
DDX41-201ENST00000330503 EDDM3BP56851 147 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 RPL30P62888 115 aaKnown RBP14.08□□□□□ -0.16
DDX41-201ENST00000330503 FAM209AQ5JX71 171 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 COMMD7Q86VX2 200 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 C14orf79Q96F83 325 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 PHYHIPLQ96FC7 376 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 SPIN2AQ99865 258 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 SPIN2BQ9BPZ2 258 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 ITPR1Q14643 2758 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 NBEAQ8NFP9 2946 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 ZNF16P17020 682 aaPredicted RBP14.08□□□□□ -0.16
DDX41-201ENST00000330503 APOBEC3AP31941 199 aaPredicted RBP14.08□□□□□ -0.16
DDX41-201ENST00000330503 ID3Q02535 119 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 LTC4SQ16873 150 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 AGMATQ9BSE5 352 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 EGLN1Q9GZT9 426 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 SLC25A32Q9H2D1 315 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 ZNF665Q9H7R5 613 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 PLEKHF2Q9H8W4 249 aa14.08□□□□□ -0.16
DDX41-201ENST00000330503 F2RL2O00254 374 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 PITX3O75364 302 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 IGKV1-5P01602 117 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 NKX2-1P43699 371 aaPredicted RBP14.07□□□□□ -0.16
DDX41-201ENST00000330503 LOXL3P58215 753 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 POLR2GP62487 172 aaKnown RBP eCLIP14.07□□□□□ -0.16
DDX41-201ENST00000330503 MSMO1Q15800 293 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 CLEC9AQ6UXN8 241 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 Q6ZRM9 215 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 BAP18Q8IXM2 172 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 ZNF808Q8N4W9 903 aaPredicted RBP14.07□□□□□ -0.16
DDX41-201ENST00000330503 FAM216BQ8N7L0 139 aa14.07□□□□□ -0.16
DDX41-201ENST00000330503 TAAR5O14804 337 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 P2RY1P47900 373 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 TMEM33P57088 247 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 BRWD1-AS2P59051 145 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 EFNB3Q15768 340 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 IZUMO4Q1ZYL8 232 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 C17orf58Q2M2W7 97 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 MORN2Q502X0 79 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 RPL7L1Q6DKI1 246 aaKnown RBP14.06□□□□□ -0.16
DDX41-201ENST00000330503 FGFRL1Q8N441 504 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 ABHD14BQ96IU4 210 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 REG4Q9BYZ8 158 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 SAP30LQ9HAJ7 183 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 ZC4H2Q9NQZ6 224 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 LIN7CQ9NUP9 197 aaKnown RBP14.06□□□□□ -0.16
DDX41-201ENST00000330503 OR6C3Q9NZP0 311 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 PSG11Q9UQ72 335 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 LRRC30A6NM36 301 aa14.06□□□□□ -0.16
DDX41-201ENST00000330503 TMEM178BH3BS89 294 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms