RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 C10orf35Q96D05 121 aa8.81□□□□□ -1
CHD3-201ENST00000330494 OR10C1Q96KK4 312 aa8.81□□□□□ -1
CHD3-201ENST00000330494 CISD1Q9NZ45 108 aaKnown RBP8.81□□□□□ -1
CHD3-201ENST00000330494 GZMHP20718 246 aa8.81□□□□□ -1
CHD3-201ENST00000330494 TUSC1Q2TAM9 212 aa8.81□□□□□ -1
CHD3-201ENST00000330494 FAM186AA6NE01 2351 aa8.81□□□□□ -1
CHD3-201ENST00000330494 NEURL1O76050 574 aa8.81□□□□□ -1
CHD3-201ENST00000330494 CSN3P07498 182 aa8.81□□□□□ -1
CHD3-201ENST00000330494 FCGR3AP08637 254 aa8.81□□□□□ -1
CHD3-201ENST00000330494 SMIM10L1P0DMW3 83 aa8.81□□□□□ -1
CHD3-201ENST00000330494 ASCL5Q7RTU5 278 aa8.81□□□□□ -1
CHD3-201ENST00000330494 OR4X1Q8NH49 305 aa8.81□□□□□ -1
CHD3-201ENST00000330494 SMIM10Q96HG1 83 aa8.81□□□□□ -1
CHD3-201ENST00000330494 A0A1W2PPC1 479 aa8.81□□□□□ -1
CHD3-201ENST00000330494 A0A1W2PR77 199 aa8.81□□□□□ -1
CHD3-201ENST00000330494 WDR61Q9GZS3 305 aaKnown RBP8.81□□□□□ -1
CHD3-201ENST00000330494 LHFPL6Q9Y693 200 aa8.81□□□□□ -1
CHD3-201ENST00000330494 TMEM210A6NLX4 147 aa8.81□□□□□ -1
CHD3-201ENST00000330494 OR2H2O95918 312 aa8.81□□□□□ -1
CHD3-201ENST00000330494 CEACAM21Q3KPI0 293 aa8.81□□□□□ -1
CHD3-201ENST00000330494 FHL5Q5TD97 284 aa8.81□□□□□ -1
CHD3-201ENST00000330494 HSD17B13Q7Z5P4 300 aaPredicted RBP8.81□□□□□ -1
CHD3-201ENST00000330494 OR51B2Q9Y5P1 312 aa8.81□□□□□ -1
CHD3-201ENST00000330494 A0A1B0GV90 55 aa8.8□□□□□ -1
CHD3-201ENST00000330494 TMEM218A2RU14 115 aa8.8□□□□□ -1
CHD3-201ENST00000330494 PRR33A8MZF0 331 aa8.8□□□□□ -1
CHD3-201ENST00000330494 EIF3GO75821 320 aaKnown RBP eCLIP8.8□□□□□ -1
CHD3-201ENST00000330494 HBZP02008 142 aa8.8□□□□□ -1
CHD3-201ENST00000330494 PRF1P14222 555 aa8.8□□□□□ -1
CHD3-201ENST00000330494 BMI1P35226 326 aa8.8□□□□□ -1
CHD3-201ENST00000330494 LINC01560Q8TB33 94 aa8.8□□□□□ -1
CHD3-201ENST00000330494 HEATR5BQ9P2D3 2071 aa8.8□□□□□ -1
CHD3-201ENST00000330494 A0A0G2JMM0 328 aa8.8□□□□□ -1
CHD3-201ENST00000330494 A0A1W2PPB8 328 aa8.8□□□□□ -1
CHD3-201ENST00000330494 A0A1W2PRS3 328 aa8.8□□□□□ -1
CHD3-201ENST00000330494 A1L4Q6 167 aa8.8□□□□□ -1
CHD3-201ENST00000330494 KIR3DP1A8MWS1 328 aa8.8□□□□□ -1
CHD3-201ENST00000330494 M0R2Z0 102 aa8.8□□□□□ -1
CHD3-201ENST00000330494 GPR6P46095 362 aaPredicted RBP8.8□□□□□ -1
CHD3-201ENST00000330494 TFPI2P48307 235 aa8.8□□□□□ -1
CHD3-201ENST00000330494 MMP16P51512 607 aa8.8□□□□□ -1
CHD3-201ENST00000330494 EWSR1Q01844 656 aaKnown RBP eCLIP8.8□□□□□ -1
CHD3-201ENST00000330494 KCNK17Q96T54 332 aa8.8□□□□□ -1
CHD3-201ENST00000330494 RAB33BQ9H082 229 aa8.8□□□□□ -1
CHD3-201ENST00000330494 C5orf52A6NGY3 159 aa8.8□□□□□ -1
CHD3-201ENST00000330494 OR10J1P30954 320 aa8.8□□□□□ -1
CHD3-201ENST00000330494 PARP11Q9NR21 331 aa8.8□□□□□ -1
CHD3-201ENST00000330494 TMSB15BA0A087X1C1 80 aa8.8□□□□□ -1
CHD3-201ENST00000330494 RBFOX3A6NFN3 312 aa8.8□□□□□ -1
CHD3-201ENST00000330494 RAMP1O60894 148 aa8.8□□□□□ -1
CHD3-201ENST00000330494 CRHP06850 196 aa8.8□□□□□ -1
CHD3-201ENST00000330494 RPS4Y1P22090 263 aaKnown RBP8.8□□□□□ -1
CHD3-201ENST00000330494 LOXL4Q96JB6 756 aa8.8□□□□□ -1
CHD3-201ENST00000330494 PIPOXQ9P0Z9 390 aa8.8□□□□□ -1
CHD3-201ENST00000330494 K7ERU9 68 aa8.8□□□□□ -1
CHD3-201ENST00000330494 SUCLG1P53597 346 aaKnown RBP8.8□□□□□ -1
CHD3-201ENST00000330494 LGALSLQ3ZCW2 172 aaPredicted RBP8.8□□□□□ -1
CHD3-201ENST00000330494 SLC25A47Q6Q0C1 308 aa8.8□□□□□ -1
CHD3-201ENST00000330494 OR4A4PQ8NGN8 299 aa8.8□□□□□ -1
CHD3-201ENST00000330494 FAM222BQ8WU58 562 aa8.8□□□□□ -1
CHD3-201ENST00000330494 VWCEQ96DN2 955 aa8.8□□□□□ -1
CHD3-201ENST00000330494 ADTRPQ96IZ2 230 aa8.8□□□□□ -1
CHD3-201ENST00000330494 RABAC1Q9UI14 185 aa8.8□□□□□ -1
CHD3-201ENST00000330494 FAM87AP0C7U9 286 aa8.8□□□□□ -1
CHD3-201ENST00000330494 PSMB2P49721 201 aa8.8□□□□□ -1
CHD3-201ENST00000330494 Q5PR19 223 aa8.8□□□□□ -1
CHD3-201ENST00000330494 OVCH2Q7RTZ1 564 aa8.8□□□□□ -1
CHD3-201ENST00000330494 C9orf62Q8N4C0 152 aa8.8□□□□□ -1
CHD3-201ENST00000330494 VN1R17PQ8TDU5 208 aa8.8□□□□□ -1
CHD3-201ENST00000330494 HSF4Q9ULV5 492 aa8.8□□□□□ -1
CHD3-201ENST00000330494 WASHC3Q9Y3C0 194 aa8.8□□□□□ -1
CHD3-201ENST00000330494 CGB1A6NKQ9 187 aa8.79□□□□□ -1
CHD3-201ENST00000330494 COX6B1P14854 86 aa8.79□□□□□ -1
CHD3-201ENST00000330494 RNF2Q99496 336 aa8.79□□□□□ -1
CHD3-201ENST00000330494 SRD5A3Q9H8P0 318 aa8.79□□□□□ -1
CHD3-201ENST00000330494 KCNMB2Q9Y691 235 aa8.79□□□□□ -1
CHD3-201ENST00000330494 J3QR06 171 aa8.79□□□□□ -1
CHD3-201ENST00000330494 HTR1DP28221 377 aa8.79□□□□□ -1
CHD3-201ENST00000330494 NPBWR2P48146 333 aa8.79□□□□□ -1
CHD3-201ENST00000330494 RPEL1Q2QD12 228 aa8.79□□□□□ -1
CHD3-201ENST00000330494 TEX30Q5JUR7 227 aa8.79□□□□□ -1
CHD3-201ENST00000330494 HCP5Q6MZN7 132 aa8.79□□□□□ -1
CHD3-201ENST00000330494 WDR73Q6P4I2 378 aa8.79□□□□□ -1
CHD3-201ENST00000330494 PET117Q6UWS5 81 aa8.79□□□□□ -1
CHD3-201ENST00000330494 ZNF714Q96N38 554 aa8.79□□□□□ -1
CHD3-201ENST00000330494 SIGLEC5O15389 551 aa8.79□□□□□ -1
CHD3-201ENST00000330494 P2RX4Q99571 388 aa8.79□□□□□ -1
CHD3-201ENST00000330494 DOCK4Q8N1I0 1966 aa8.79□□□□□ -1
CHD3-201ENST00000330494 IGKV1D-42A0A075B6H8 117 aa8.79□□□□□ -1
CHD3-201ENST00000330494 P2RY1P47900 373 aa8.79□□□□□ -1
CHD3-201ENST00000330494 IL24Q13007 206 aa8.79□□□□□ -1
CHD3-201ENST00000330494 ZNF880Q6PDB4 577 aa8.79□□□□□ -1
CHD3-201ENST00000330494 OR5R1Q8NH85 324 aa8.79□□□□□ -1
CHD3-201ENST00000330494 HEXA-AS1Q9H8Q6 139 aa8.79□□□□□ -1
CHD3-201ENST00000330494 HELTA6NFD8 242 aa8.79□□□□□ -1
CHD3-201ENST00000330494 AHRRA9YTQ3 701 aa8.79□□□□□ -1
CHD3-201ENST00000330494 C11orf94C9JXX5 98 aa8.79□□□□□ -1
CHD3-201ENST00000330494 HAX1O00165 279 aa8.79□□□□□ -1
CHD3-201ENST00000330494 F12P00748 615 aaPredicted RBP8.79□□□□□ -1
CHD3-201ENST00000330494 ORM1P02763 201 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms