RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 FZR1Q9UM11 496 aa11.9□□□□□ -0.51
ATP2C1-201ENST00000328560 TNRC6BQ9UPQ9 1833 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 CLEC18AA5D8T8 446 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 CLDN1O95832 211 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 IGKV1-5P01602 117 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 Q6P435 159 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 CNEP1R1Q8N9A8 125 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 CLEC18CQ8NCF0 446 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 ABHD14BQ96IU4 210 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 UFSP2Q9NUQ7 469 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 PCNX2A6NKB5 2137 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 YIF1AO95070 293 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 NDUFA6P56556 154 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF816Q0VGE8 651 aaPredicted RBP11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF787Q6DD87 383 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 SLC25A40Q8TBP6 338 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 SPRR3Q9UBC9 169 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 CNOT1A5YKK6 2376 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 USF3Q68DE3 2245 aa11.89□□□□□ -0.51
ATP2C1-201ENST00000328560 WNT9BO14905 357 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 SS18L1O75177 396 aaPredicted RBP11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 HBE1P02100 147 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF295-AS1Q8N0V1 137 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 CLDND2Q8NHS1 167 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 IL22RA2Q969J5 263 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 UBE2CO00762 179 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 MMP9P14780 707 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 OR3A1P47881 315 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 BEND4Q6ZU67 534 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 TPRX1Q8N7U7 411 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 TCTEX1D2Q8WW35 142 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 TVP23CQ96ET8 276 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 UBE2L5PA0A1B0GUS4 154 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 AP4M1O00189 453 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 OR8U8P0C7N1 319 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 LTC4SQ16873 150 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 LINC00596Q86U02 117 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 DRAM1Q8N682 238 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 OR1L1Q8NH94 360 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 PLPPR2Q96GM1 343 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 PKIBQ9C010 78 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 ICE1Q9Y2F5 2266 aa11.88□□□□□ -0.51
ATP2C1-201ENST00000328560 TTC28Q96AY4 2481 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 TGIF2-C20orf24A0A0A6YYL0 155 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 SH2D1BO14796 132 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 AGFG2O95081 481 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 RD3LP0DJH9 198 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 IL2RGP31785 369 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 OR8G1Q15617 311 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 SPINK9Q5DT21 86 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 KDF1Q8NAX2 398 aaPredicted RBP11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 MUCL1Q96DR8 90 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 POLDIP2Q9Y2S7 368 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 CEBPZOSA8MTT3 80 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 S100A8P05109 93 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 CXCL1P09341 107 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF585BQ52M93 769 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 PDZD11Q5EBL8 140 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 RBMXL1Q96E39 390 aaKnown RBP11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 WDYHV1Q96HA8 205 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 KCNIP1Q9NZI2 227 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 A0A1B0GW64 132 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 CYB5BO43169 146 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 IGLV2-14P01704 120 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 B2MP61769 119 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 AESQ08117 197 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 BTNL3Q6UXE8 466 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 HEPN1Q6WQI6 88 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 FGFRL1Q8N441 504 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 RFESDQ8TAC1 157 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 Q8WTZ3 238 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 GTF3AQ92664 365 aaKnown RBP11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 CABLES2Q9BTV7 478 aa11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 LIN7CQ9NUP9 197 aaKnown RBP11.87□□□□□ -0.51
ATP2C1-201ENST00000328560 CLN5O75503 358 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 G6PCP35575 357 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 CD200P41217 278 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 PLA2G2CQ5R387 149 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 OR52L2PQ8NGH6 319 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 OR2D2Q9H210 308 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 SMDT1Q9H4I9 107 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 METTL1Q9UBP6 276 aaKnown RBP11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 IGHV3-43A0A0B4J1X8 118 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 LRP5LA4QPB2 252 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 RAMP3O60896 148 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 SMPD2O60906 423 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 IGHV3-43DP0DP04 118 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 GABRA2P47869 451 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 ERVFRD-1P60508 538 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 HBG1P69891 147 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 HBG2P69892 147 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF497Q6ZNH5 498 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 TRIB1Q96RU8 372 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 LOC400499M0QZD8 3231 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 NBEAQ8NFP9 2946 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms