RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CLDN14O95500 239 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 CD74P04233 296 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 MEOX2P50222 304 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 SELENOTP62341 195 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 PDPNQ86YL7 162 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 MRPL24Q96A35 216 aaKnown RBP9.83□□□□□ -0.84
COL4A5-201ENST00000328300 MGAMO43451 1857 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 DYNLT3P51808 116 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 SERF2P84101 59 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.83□□□□□ -0.84
COL4A5-201ENST00000328300 TRBV23-1A0A0A0MS06 115 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 DBX1A6NMT0 343 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 FOXH1O75593 365 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 ACSF3Q4G176 576 aaPredicted RBP9.83□□□□□ -0.84
COL4A5-201ENST00000328300 MYPOPQ86VE0 399 aaPredicted RBP9.83□□□□□ -0.84
COL4A5-201ENST00000328300 OR10A7Q8NGE5 316 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 ST6GAL2Q96JF0 529 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 DLL3Q9NYJ7 618 aa9.83□□□□□ -0.84
COL4A5-201ENST00000328300 YTHDF2Q9Y5A9 579 aaKnown RBP9.83□□□□□ -0.84
COL4A5-201ENST00000328300 GNG4P50150 75 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 EWSR1Q01844 656 aaKnown RBP eCLIP9.82□□□□□ -0.84
COL4A5-201ENST00000328300 TEPPQ6URK8 271 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 OR9G1Q8NH87 305 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 PLPPR2Q96GM1 343 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 OR51B2Q9Y5P1 312 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 CLDN34H7C241 214 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 WDYHV1Q96HA8 205 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 TM2D1Q9BX74 207 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 PARP11Q9NR21 331 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 CALYQ9NYX4 217 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 hCG_38984A0A1B0GV85 526 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 PDE6DO43924 150 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 ADAP1O75689 374 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 THY1P04216 161 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 RNFT1Q5M7Z0 435 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 CCL13Q99616 98 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 VSIG4Q9Y279 399 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 IL18BPO95998 194 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 LSM10Q969L4 123 aaKnown RBP9.82□□□□□ -0.84
COL4A5-201ENST00000328300 ANAPC16Q96DE5 110 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 NPDC1Q9NQX5 325 aaPredicted RBP9.82□□□□□ -0.84
COL4A5-201ENST00000328300 J3QR06 171 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 MMP7P09237 267 aaPredicted RBP9.82□□□□□ -0.84
COL4A5-201ENST00000328300 FAM87AP0C7U9 286 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 SLC35B1P78383 322 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 CCL8P80075 99 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 CD300CQ08708 224 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 TOMM20LQ6UXN7 152 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 NHLRC2Q8NBF2 726 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 KCNK7Q9Y2U2 307 aa9.82□□□□□ -0.84
COL4A5-201ENST00000328300 CLDN18P56856 261 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 RTN4RL2Q86UN3 420 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 OR4D10Q8NGI6 311 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 ZMIZ1Q9ULJ6 1067 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 CTXND1A0A1B0GTU2 59 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 GFRA1P56159 465 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 ERVFC1-1P60608 527 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 NAT8Q9UHE5 227 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 IGHV3OR15-7A0A075B7D8 119 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 NKX2-6A6NCS4 301 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 PSG2P11465 335 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 PTTG1IPP53801 180 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 UBE2L3P68036 154 aaKnown RBP9.81□□□□□ -0.84
COL4A5-201ENST00000328300 PAX5Q02548 391 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 SNAI3Q3KNW1 292 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 PCSK4Q6UW60 755 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 IGHV1-69-2A0A0G2JMI3 117 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 CXorf1O96002 111 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 PPP1CCP36873 323 aaKnown RBP9.81□□□□□ -0.84
COL4A5-201ENST00000328300 RPL27AP46776 148 aaKnown RBP9.81□□□□□ -0.84
COL4A5-201ENST00000328300 SUCLG1P53597 346 aaKnown RBP9.81□□□□□ -0.84
COL4A5-201ENST00000328300 MMDQ15546 238 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 ATP1A1-AS1Q5TC04 95 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 MRGPRFQ96AM1 343 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 SLC25A38Q96DW6 304 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 FBLN5Q9UBX5 448 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 TNFSF18Q9UNG2 199 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 TRAPPC1Q9Y5R8 145 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 TRAV30A0A087WSZ9 112 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 GYPAP02724 150 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 RFPL3SP0C7P2 107 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 C19orf35Q6ZS72 473 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 ANK1P16157 1881 aa9.81□□□□□ -0.84
COL4A5-201ENST00000328300 SERTM2A0A1B0GWG4 89 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 SMPD2O60906 423 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 MEF2CQ06413 473 aaPredicted RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 LYRM2Q9NU23 88 aaPredicted RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 PIN1P1O15428 100 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 ARG1P05089 322 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 LIPFP07098 398 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 ID1P41134 155 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 LHX2P50458 406 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 LYZP61626 148 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 ANKRD55Q3KP44 614 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 C10orf113Q5VZT2 155 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 TET1Q8NFU7 2136 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 IGKV3D-15A0A087WSY6 115 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 NPIPB7O75200 414 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 PTBP3O95758 552 aaKnown RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 USF1P22415 310 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms