RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 NUBP1P53384 320 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 DPRXA6NFQ7 191 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 A8MWL6 223 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 C8orf82Q6P1X6 216 aaPredicted RBP14.34□□□□□ -0.11
SMAD3-201ENST00000327367 ZAR1Q86SH2 424 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 ZNF441Q8N8Z8 693 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 IGHV5-51A0A0C4DH38 117 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 RPL36A-HNRNPH2H7BZ11 118 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 ZNF735P0CB33 412 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 SFTA2Q6UW10 78 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 FGF14Q92915 247 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 MVB12AQ96EY5 273 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 C18orf15Q96N68 181 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 LINC00470Q9BZP3 86 aa14.34□□□□□ -0.11
SMAD3-201ENST00000327367 A1L4Q6 167 aa14.33□□□□□ -0.11
SMAD3-201ENST00000327367 HLA-DQB1P01920 261 aa14.33□□□□□ -0.11
SMAD3-201ENST00000327367 KIR3DL2P43630 455 aa14.33□□□□□ -0.11
SMAD3-201ENST00000327367 TMEM177Q53S58 311 aa14.33□□□□□ -0.11
SMAD3-201ENST00000327367 RBFOX2O43251 390 aaKnown RBP eCLIP14.33□□□□□ -0.126e-10■■■■□ 20.1
SMAD3-201ENST00000327367 HSPB7Q9UBY9 170 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 ASCC3Q8N3C0 2202 aaKnown RBP14.33□□□□□ -0.12
SMAD3-201ENST00000327367 FNDC4Q9H6D8 234 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-201ENST00000327367 FCGR3AP08637 254 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 ECSCRQ19T08 205 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 FBXO46Q6PJ61 603 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-201ENST00000327367 Q6ZNB5 142 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 NPIPB8E9PQR5 432 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 NPIPB9F8W1W9 429 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 NPIPB7O75200 414 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 HLA-DQA1P01909 254 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 FCGR2BP31994 310 aaPredicted RBP14.33□□□□□ -0.12
SMAD3-201ENST00000327367 TFPI2P48307 235 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 VEGFBP49765 207 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 C19orf54Q5BKX5 351 aa14.33□□□□□ -0.12
SMAD3-201ENST00000327367 MT-ND6P03923 174 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 PRF1P14222 555 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 OR4D5Q8NGN0 318 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 PRSS27Q9BQR3 290 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 TUBD1Q9UJT1 453 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 PGPA6NDG6 321 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 CTSSP25774 331 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 P2RY4P51582 365 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 MYO5AQ9Y4I1 1855 aaKnown RBP14.32□□□□□ -0.12
SMAD3-201ENST00000327367 IGKV3OR2-268A0A0C4DH90 116 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 NDUFS8O00217 210 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 CRYBB3P26998 211 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 KCNS1Q96KK3 526 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 AMMECR1Q9Y4X0 333 aaPredicted RBP14.32□□□□□ -0.12
SMAD3-201ENST00000327367 SYNGR1O43759 233 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 CHRNA10Q9GZZ6 450 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 RNF122Q9H9V4 155 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 CISD1Q9NZ45 108 aaKnown RBP14.32□□□□□ -0.12
SMAD3-201ENST00000327367 SPCS1Q9Y6A9 102 aa14.32□□□□□ -0.12
SMAD3-201ENST00000327367 PSG6Q00889 435 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 ELSPBP1Q96BH3 223 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 ABHD14BQ96IU4 210 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 PRNDQ9UKY0 176 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 MBNL2Q5VZF2 373 aaKnown RBP14.31□□□□□ -0.12
SMAD3-201ENST00000327367 QTRT1Q9BXR0 403 aaKnown RBP14.31□□□□□ -0.12
SMAD3-201ENST00000327367 A0A0U1RQV5 110 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 C1QTNF9BB2RNN3 333 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 FOXA3P55318 350 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-201ENST00000327367 TMEM211Q6ICI0 200 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 OR5R1Q8NH85 324 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 WNT16Q9UBV4 365 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 TMEM265A0A087WTH1 108 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-201ENST00000327367 C1QAP02745 245 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 SFRP2Q96HF1 295 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 SERGEFQ9UGK8 458 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 CELA2BP08218 269 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-201ENST00000327367 ZNF124Q15973 351 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 GFRALQ6UXV0 394 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 MAP1LC3AQ9H492 121 aa14.31□□□□□ -0.12
SMAD3-201ENST00000327367 ZNF107Q9UII5 783 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-201ENST00000327367 ISG15P05161 165 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 SCTP09683 121 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 ATG4DQ86TL0 474 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-201ENST00000327367 SRSF12Q8WXF0 261 aaKnown RBP14.3□□□□□ -0.12
SMAD3-201ENST00000327367 HYAL1Q12794 435 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 NUDT10Q8NFP7 164 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 NUDT11Q96G61 164 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 SMDT1Q9H4I9 107 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 COL14A1Q05707 1796 aaKnown RBP14.3□□□□□ -0.12
SMAD3-201ENST00000327367 CENPVL1A0A0U1RR11 272 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 FAM90A27PA6NNH2 459 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 SERF2P84101 59 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 PTCRAQ6ISU1 281 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-201ENST00000327367 FAM19A2Q8N3H0 131 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 SELENOKQ9Y6D0 94 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 COL10A1Q03692 680 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 SPINK14Q6IE38 97 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 OR6X1Q8NH79 312 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 VSTM2AQ8TAG5 236 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 ARID1AO14497 2285 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 LRRC75BQ2VPJ9 315 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 TEX30Q5JUR7 227 aa14.3□□□□□ -0.12
SMAD3-201ENST00000327367 GPR6P46095 362 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms