RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 H0Y980 276 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 PDGFBP01127 241 aaPredicted RBP12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 IGKV1-39P01597 117 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 IGKV1D-39P04432 117 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 HIST1H3AP68431 136 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 TMEM41BQ5BJD5 291 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 TMEM68Q96MH6 324 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 RAB40CQ96S21 281 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 ACTR3CQ9C0K3 210 aaPredicted RBP12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 CLN8Q9UBY8 286 aa12.17□□□□□ -0.46
CHRNA3-201ENST00000326828 TDRG1Q3Y452 100 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 SP5Q6BEB4 398 aaPredicted RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 ACSM6Q6P461 480 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 ZNF808Q8N4W9 903 aaPredicted RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 FADS6Q8N9I5 356 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 CTDSP1Q9GZU7 261 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 CHRNA10Q9GZZ6 450 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 PATZ1Q9HBE1 687 aaKnown RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 TMEM242Q9NWH2 141 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 SVILO95425 2214 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 KBTBD11O94819 623 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 MBP02144 154 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 SPATA46Q5T0L3 261 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 TOMM20LQ6UXN7 152 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 MRPL21Q7Z2W9 205 aaKnown RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 MKXQ8IYA7 352 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 TAF15Q92804 592 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 MS4A10Q96PG2 267 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 DERL1Q9BUN8 251 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 FGF23Q9GZV9 251 aaPredicted RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 PLSCR2Q9NRY7 297 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 PTRH2Q9Y3E5 179 aaKnown RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 TRIOBPQ9H2D6 2365 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 KIR2DS1A0A191URI9 304 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 M0R143 59 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 VAMP5O95183 116 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 HRASP01112 189 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 NGFP01138 241 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 IGKV1-5P01602 117 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 LIFP15018 202 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 TGFBR3Q03167 851 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 ZNF816Q0VGE8 651 aaPredicted RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 OR8B8Q15620 311 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 IQCJQ1A5X6 159 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 WIPI1Q5MNZ9 446 aaPredicted RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 CYP2G1PQ6ZSU1 146 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 OR10G4Q8NGN3 311 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 OR10G9Q8NGN4 311 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 OR10G7Q8NGN6 311 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 TBX15Q96SF7 602 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 WDR61Q9GZS3 305 aaKnown RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 ZNF552Q9H707 407 aaPredicted RBP12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 OCIAD1Q9NX40 245 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 PAM16Q9Y3D7 125 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 TRAPPC1Q9Y5R8 145 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 EXPH5Q8NEV8 1989 aa12.16□□□□□ -0.46
CHRNA3-201ENST00000326828 SIRPB1O00241 398 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 TGOLN2O43493 480 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 CST2P09228 141 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 TCFL5Q9UL49 500 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 ATP23Q9Y6H3 246 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 CACNA1EQ15878 2313 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 ASPMQ8IZT6 3477 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 TRAV1-1A0A0B4J248 108 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 GCGP01275 180 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 COL8A2P25067 703 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 GCH1P30793 250 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 MPLP40238 635 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 CNN1P51911 297 aaKnown RBP12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 FOXG1P55316 489 aaPredicted RBP12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 LRRC75BQ2VPJ9 315 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 TMEM42Q69YG0 159 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 DPPA3Q6W0C5 159 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 IMMP2LQ96T52 175 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 OR2W1Q9Y3N9 320 aa12.15□□□□□ -0.46
CHRNA3-201ENST00000326828 LILRA1O75019 489 aa12.15□□□□□ -0.47
CHRNA3-201ENST00000326828 TFF3Q07654 80 aa12.15□□□□□ -0.47
CHRNA3-201ENST00000326828 GCSAMLQ5JQS6 135 aa12.15□□□□□ -0.47
CHRNA3-201ENST00000326828 RABEPKQ7Z6M1 372 aa12.15□□□□□ -0.47
CHRNA3-201ENST00000326828 POLR3KQ9Y2Y1 108 aaPredicted RBP12.15□□□□□ -0.47
CHRNA3-201ENST00000326828 IGLV3-32A0A0A0MS00 114 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 OR6C6A6NF89 314 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 B4E171 279 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 NAPSAO96009 420 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 NPSP0C0P6 89 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 RFPL3SP0C7P2 107 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 TSPAN7P41732 249 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 THBS3P49746 956 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 HOXA4Q00056 320 aaPredicted RBP12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 PCSK4Q6UW60 755 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 TMEM170AQ8WVE7 144 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 OR5P3Q8WZ94 311 aa12.14□□□□□ -0.47
CHRNA3-201ENST00000326828 SEMA5BQ9P283 1151 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms