RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SCGB1C1Q8TD33 95 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 RARRES2Q99969 163 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 MMP24Q9Y5R2 645 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 MUC3AQ02505 3323 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 SPAARA0A1B0GVQ0 90 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 AHRRA9YTQ3 701 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 C12orf77C9JDV5 145 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 IL2RGP31785 369 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 OR3A1P47881 315 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 HBG1P69891 147 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 HBG2P69892 147 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 ZNF718Q3SXZ3 478 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 ACSF3Q4G176 576 aaPredicted RBP18.81■□□□□ 0.6
PNKP-201ENST00000322344 THNSL2Q86YJ6 484 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 HIST1H2BAQ96A08 127 aa18.81■□□□□ 0.6
PNKP-201ENST00000322344 PCNX2A6NKB5 2137 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 TRAV1-1A0A0B4J248 108 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 A6NLC8 198 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 ZNF891A8MT65 544 aaPredicted RBP18.8■□□□□ 0.6
PNKP-201ENST00000322344 IFNL4K9M1U5 179 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 IGLV1-44P01699 117 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 OR8U8P0C7N1 319 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 CECR9P0C854 216 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 AKR1C3P42330 323 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 CEBPDP49716 269 aaPredicted RBP18.8■□□□□ 0.6
PNKP-201ENST00000322344 MZT1Q08AG7 82 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 IGF2-ASQ6U949 168 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 OR1L1Q8NH94 360 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 RNF150Q9ULK6 438 aa18.8■□□□□ 0.6
PNKP-201ENST00000322344 GCH1P30793 250 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 ZNF506Q5JVG8 444 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 ZNF826PQ6ZT77 177 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 DOCK7Q96N67 2140 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 PSMG3Q9BT73 122 aaPredicted RBP18.79■□□□□ 0.6
PNKP-201ENST00000322344 PARD6GQ9BYG4 376 aaPredicted RBP18.79■□□□□ 0.6
PNKP-201ENST00000322344 WNT9BO14905 357 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 HSPB1P04792 205 aaKnown RBP18.79■□□□□ 0.6
PNKP-201ENST00000322344 IAPPP10997 89 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 WT1P19544 449 aaPredicted RBP18.79■□□□□ 0.6
PNKP-201ENST00000322344 PTAFRP25105 342 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 CATR1Q13166 79 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 MBNL2Q5VZF2 373 aaKnown RBP18.79■□□□□ 0.6
PNKP-201ENST00000322344 WDR82Q6UXN9 313 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 FGFRL1Q8N441 504 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 SFT2D1Q8WV19 159 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 NINJ1Q92982 152 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 PARD6AQ9NPB6 346 aa18.79■□□□□ 0.6
PNKP-201ENST00000322344 WDFY4Q6ZS81 3184 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 WISP2O76076 250 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 P2RY6Q15077 328 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 SMIM21Q3B7S5 101 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 CXorf67Q86X51 503 aaPredicted RBP18.78■□□□□ 0.6
PNKP-201ENST00000322344 ZNF525Q8N782 197 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 TCTEX1D1Q8N7M0 179 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 PROCRQ9UNN8 238 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 C1orf196B1AJZ1 125 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 HBZP02008 142 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 SRP19P09132 144 aaKnown RBP18.78■□□□□ 0.6
PNKP-201ENST00000322344 FAM169BQ8N8A8 192 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 COQ2Q96H96 371 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 C20orf24Q9BUV8 137 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 OR2D2Q9H210 308 aa18.78■□□□□ 0.6
PNKP-201ENST00000322344 A0A1B0GWJ7 208 aa18.77■□□□□ 0.6
PNKP-201ENST00000322344 SCAF4O95104 1147 aaKnown RBP18.77■□□□□ 0.6
PNKP-201ENST00000322344 METTL15P1P0C7V9 234 aa18.77■□□□□ 0.6
PNKP-201ENST00000322344 AESQ08117 197 aa18.77■□□□□ 0.6
PNKP-201ENST00000322344 FOXF2Q12947 444 aa18.77■□□□□ 0.6
PNKP-201ENST00000322344 EIF4EBP1Q13541 118 aaPredicted RBP18.77■□□□□ 0.6
PNKP-201ENST00000322344 PRAMEF6Q5VXH4 476 aa18.77■□□□□ 0.6
PNKP-201ENST00000322344 Q6ZR03 302 aa18.77■□□□□ 0.6
PNKP-201ENST00000322344 ICAM4Q14773 271 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 KHDC3LQ587J8 217 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 TRAT1Q6PIZ9 186 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 CLDND2Q8NHS1 167 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 LURAP1Q96LR2 239 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 ZNF71Q9NQZ8 489 aaPredicted RBP18.76■□□□□ 0.59
PNKP-201ENST00000322344 IGHV2OR16-5A0A0B4J2B6 119 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 PPIHO43447 177 aaKnown RBP18.76■□□□□ 0.59
PNKP-201ENST00000322344 CEACAM4O75871 244 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 IFNA4P05014 189 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 GABRA2P47869 451 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 UBE2KP61086 200 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 SERF2P84101 59 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 HABP2Q14520 560 aaPredicted RBP18.76■□□□□ 0.59
PNKP-201ENST00000322344 HAGHQ16775 308 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 LRRC75BQ2VPJ9 315 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 LILRB2Q8N423 598 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 OR52L2PQ8NGH6 319 aa18.76■□□□□ 0.59
PNKP-201ENST00000322344 IGHV1-18A0A0C4DH31 117 aa18.75■□□□□ 0.59
PNKP-201ENST00000322344 TNFSF13O75888 250 aa18.75■□□□□ 0.59
PNKP-201ENST00000322344 FABP6P51161 128 aa18.75■□□□□ 0.59
PNKP-201ENST00000322344 PAX5Q02548 391 aa18.75■□□□□ 0.59
PNKP-201ENST00000322344 DEFB109BQ30KR1 87 aa18.75■□□□□ 0.59
PNKP-201ENST00000322344 BHLHA15Q7RTS1 189 aaPredicted RBP18.75■□□□□ 0.59
PNKP-201ENST00000322344 ZNF561Q8N587 486 aa18.75■□□□□ 0.59
PNKP-201ENST00000322344 ZNF610Q8N9Z0 462 aa18.75■□□□□ 0.59
PNKP-201ENST00000322344 HSPB7Q9UBY9 170 aa18.75■□□□□ 0.59
PNKP-201ENST00000322344 PUS1Q9Y606 427 aaKnown RBP eCLIP18.75■□□□□ 0.59
PNKP-201ENST00000322344 CGAP01215 116 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 P0C879 139 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms