RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 PLXNB3Q9ULL4 1909 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 IGKV1D-8A0A087WSZ0 117 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 GRIFINA4D1Z8 144 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 M0R1B8 84 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 ZNF83P51522 516 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 PRAMEF5Q5TYX0 476 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 PRAMEF6Q5VXH4 476 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 KDF1Q8NAX2 398 aaPredicted RBP13.16□□□□□ -0.3
VARS2-201ENST00000321897 MRGPRFQ96AM1 343 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 C14orf144Q96I85 54 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 F8VVB4 439 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 F8VWA3 439 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 SIAH2O43255 324 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 PAGE4O60829 102 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 FCGR3AP08637 254 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 GNG3P63215 75 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 SSPNQ14714 243 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 H2BFWTQ7Z2G1 175 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 OR2Z1Q8NG97 314 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
VARS2-201ENST00000321897 FCN1O00602 326 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 TOX3O15405 576 aaPredicted RBP13.16□□□□□ -0.3
VARS2-201ENST00000321897 COX6A1P12074 109 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 CATR1Q13166 79 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 ZNF766Q5HY98 468 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 CLDN23Q96B33 292 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 OR2J1Q9GZK6 312 aa13.16□□□□□ -0.3
VARS2-201ENST00000321897 ISG15P05161 165 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 COX5AP20674 150 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 AGAP20933 346 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 PNRC1Q12796 327 aaPredicted RBP13.15□□□□□ -0.3
VARS2-201ENST00000321897 NAT8BQ9UHF3 227 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 CEP295Q9C0D2 2601 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 TMEM14DPA8MWL7 114 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 ZNF17P17021 662 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 FOXG1P55316 489 aaPredicted RBP13.15□□□□□ -0.3
VARS2-201ENST00000321897 FAM27BQ5VT28 67 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 MRPL30Q8TCC3 161 aaKnown RBP13.15□□□□□ -0.3
VARS2-201ENST00000321897 CTDSP1Q9GZU7 261 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 NAT8Q9UHE5 227 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 MUC6Q6W4X9 2439 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 A6NNC1 897 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 ENSAO43768 121 aaKnown RBP13.15□□□□□ -0.3
VARS2-201ENST00000321897 S100A7P31151 101 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 CALHM1Q8IU99 346 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 CARFQ8N187 725 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 Q9N2K0 584 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 ARL2-SNX15V9GYD0 113 aa13.15□□□□□ -0.3
VARS2-201ENST00000321897 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 SH2D1BO14796 132 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 BCL2P10415 239 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 DCAF10Q5QP82 559 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 PRR27Q6MZM9 219 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 OR5D13Q8NGL4 314 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 PSG11Q9UQ72 335 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 C17orf112F2Z3M2 114 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 RAB31Q13636 194 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 NFAM1Q8NET5 270 aaPredicted RBP13.14□□□□□ -0.31
VARS2-201ENST00000321897 ZNF596Q8TC21 504 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 PTX4Q96A99 478 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 CD5P06127 495 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 CRISP2P16562 243 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 ARR3P36575 388 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 THBS3P49746 956 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 ERVFC1-1P60608 527 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 FOXO1Q12778 655 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 WDFY1Q8IWB7 410 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 OR4A16Q8NH70 328 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 TMEM9BQ9NQ34 198 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 PILRBQ9UKJ0 227 aa13.14□□□□□ -0.31
VARS2-201ENST00000321897 OR2M7Q8NG81 312 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 OR10G4Q8NGN3 311 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 OR10G9Q8NGN4 311 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 OR10G7Q8NGN6 311 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 SIGLEC12Q96PQ1 595 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 VAX2Q9UIW0 290 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 ZNF391Q9UJN7 358 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 CYB5R3P00387 301 aaPredicted RBP13.13□□□□□ -0.31
VARS2-201ENST00000321897 ERVFRD-1P60508 538 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 MST1LQ2TV78 715 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 TMEM251Q8N6I4 163 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 TMEM105Q8N8V8 129 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 SCCPDHQ8NBX0 429 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 PINX1Q96BK5 328 aaKnown RBP13.13□□□□□ -0.31
VARS2-201ENST00000321897 HSPB9Q9BQS6 159 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 SZT2Q5T011 3432 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 ZIC3O60481 467 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 VDAC1P21796 283 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 GLIPR1P48060 266 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 PPP1R35Q8TAP8 253 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 NOL4LQ96MY1 436 aaPredicted RBP13.13□□□□□ -0.31
VARS2-201ENST00000321897 MYOZ1Q9NP98 299 aaPredicted RBP13.13□□□□□ -0.31
VARS2-201ENST00000321897 VCANP13611 3396 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 SPCS3P61009 180 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms