RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ZNF107Q9UII5 783 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-201ENST00000321105 GAB2Q9UQC2 676 aa9.38□□□□□ -0.91
TOP3A-201ENST00000321105 TRAV14DV4A0A0A6YYC5 116 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 TRIM77I1YAP6 450 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 HOXD11P31277 338 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-201ENST00000321105 WNT5AP41221 380 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 RPRMLQ8N4K4 120 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 OR5P3Q8WZ94 311 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 BCL2L2Q92843 193 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-201ENST00000321105 RAB39BQ96DA2 213 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 ONECUT1Q9UBC0 465 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 WIPI2Q9Y4P8 454 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 USP9XQ93008 2570 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-201ENST00000321105 PGLYRP1O75594 196 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-201ENST00000321105 IL18BPO95998 194 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 MGST1P10620 155 aaKnown RBP9.37□□□□□ -0.91
TOP3A-201ENST00000321105 CRYGSP22914 178 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 ACSF3Q4G176 576 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-201ENST00000321105 ETV3LQ6ZN32 361 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 TMEM252Q8N6L7 170 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 OR8G5Q8NG78 346 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 LPAR3Q9UBY5 353 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 SMPD2O60906 423 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 B3GALNT1O75752 331 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 OR2C1O95371 312 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 MT-CO2P00403 227 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 SELLP14151 372 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 PSMB3P49720 205 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 AVPI1Q5T686 147 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 LRP11Q86VZ4 500 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 BOD1Q96IK1 185 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 SMIM7Q9BQ49 75 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 C1QTNF5Q9BXJ0 243 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 SMCO4Q9NRQ5 59 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 UQCC1Q9NVA1 299 aa9.37□□□□□ -0.91
TOP3A-201ENST00000321105 CRYM-AS1A6NIL9 109 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 H0YIZ8 118 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 NDUFA6P56556 154 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 RPL31P62899 125 aaKnown RBP9.36□□□□□ -0.91
TOP3A-201ENST00000321105 HFEQ30201 348 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 C1orf185Q5T7R7 199 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 SIGIRRQ6IA17 410 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 RBMS3Q6XE24 437 aaKnown RBP9.36□□□□□ -0.91
TOP3A-201ENST00000321105 MOB3AQ96BX8 217 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 R3HDM4Q96D70 268 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 PATZ1Q9HBE1 687 aaKnown RBP9.36□□□□□ -0.91
TOP3A-201ENST00000321105 Q9N2K0 584 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 WSB1Q9Y6I7 421 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 TMEM218A2RU14 115 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-201ENST00000321105 WISP2O76076 250 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 P2RY6Q15077 328 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 LRRC10Q5BKY1 277 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 FAM166AQ6J272 317 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 TMEM230Q96A57 120 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 IL36GQ9NZH8 169 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 RNF7Q9UBF6 113 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 KCNMB2Q9Y691 235 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 C17orf112F2Z3M2 114 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 LINC00205P59089 165 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 RTL8BQ17RB0 113 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 EIF2S3LQ2VIR3 472 aaKnown RBP9.36□□□□□ -0.91
TOP3A-201ENST00000321105 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 DHRS9Q9BPW9 319 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 TMEM222Q9H0R3 208 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 EML6Q6ZMW3 1958 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 OOEPA6NGQ2 149 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 SPINK4O60575 86 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 OR4A8P0C604 315 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 ZP3P21754 424 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 MOB1BQ7L9L4 216 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 OR4A4PQ8NGN8 299 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 KPTNQ9Y664 436 aa9.36□□□□□ -0.91
TOP3A-201ENST00000321105 PTPRSQ13332 1948 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 ZNF503-AS2A6NEH8 195 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 IL13RA2Q14627 380 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 FGFRL1Q8N441 504 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 GPR146Q96CH1 333 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 MSI2Q96DH6 328 aaKnown RBP9.35□□□□□ -0.91
TOP3A-201ENST00000321105 HSF4Q9ULV5 492 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 LOC390937A0A1W2PQ73 354 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 RNF222A6NCQ9 220 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 TUBAL3A6NHL2 446 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 NAAAQ02083 359 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 RSPO1Q2MKA7 263 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-201ENST00000321105 HIST2H3AQ71DI3 136 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 DTD1Q8TEA8 209 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 TPPP3Q9BW30 176 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 SSUH2Q9Y2M2 353 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 CYB5BO43169 146 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 CD3EP07766 207 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 MMP7P09237 267 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-201ENST00000321105 HKR1P10072 659 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 CEACAM1P13688 526 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 MUC1P15941 1255 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-201ENST00000321105 NHLRC3Q5JS37 347 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
TOP3A-201ENST00000321105 RFNGQ9Y644 331 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms