RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 AKR1E2Q96JD6 320 aa6.35□□□□□ -1.39
IFT88-201ENST00000319980 Q9UFV3 132 aa6.35□□□□□ -1.39
IFT88-201ENST00000319980 SPTA1P02549 2419 aa6.35□□□□□ -1.39
IFT88-201ENST00000319980 BORCS7-ASMTA0A0B4J1R7 106 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 A0A1B0GWJ7 208 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 CLEC18AA5D8T8 446 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 WRBO00258 174 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 CHST1O43916 411 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 LPAR6P43657 344 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 TDGF1P3P51864 188 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 VAMP2P63027 116 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 EWSR1Q01844 656 aaKnown RBP eCLIP6.34□□□□□ -1.39
IFT88-201ENST00000319980 CLINT1Q14677 625 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 TBR1Q16650 682 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 MOGAT3Q86VF5 341 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 HSD17B11Q8NBQ5 300 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 CLEC18CQ8NCF0 446 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 OR13A1Q8NGR1 328 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 ARL11Q969Q4 196 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 GPR146Q96CH1 333 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 PLEKHF2Q9H8W4 249 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 PLA2G2EQ9NZK7 142 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 PCNX1Q96RV3 2341 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 IGHV3OR15-7A0A075B7D8 119 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 RAB19A4D1S5 217 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 SRRM5B3KS81 715 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 K7ENP7 123 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 CST7O76096 145 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 TMEM50AO95807 157 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 IGKV1-39P01597 117 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 IGKV1D-39P04432 117 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 PPP1CCP36873 323 aaKnown RBP6.34□□□□□ -1.39
IFT88-201ENST00000319980 CD200P41217 278 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 SRSF3P84103 164 aaKnown RBP6.34□□□□□ -1.39
IFT88-201ENST00000319980 DEFA5Q01523 94 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 BTN1A1Q13410 526 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 Q6ZRM9 215 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 GCSAMQ8N6F7 178 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 TMEM217Q8N7C4 229 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 SNRNP40Q96DI7 357 aaKnown RBP6.34□□□□□ -1.39
IFT88-201ENST00000319980 SMIM8Q96KF7 97 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 DCTN5Q9BTE1 182 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 OR2D2Q9H210 308 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 SMG1Q96Q15 3661 aaKnown RBP6.34□□□□□ -1.39
IFT88-201ENST00000319980 ROS1P08922 2347 aa6.34□□□□□ -1.39
IFT88-201ENST00000319980 IGKV1D-17A0A075B6S4 117 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 IGHV3-43A0A0B4J1X8 118 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 IGSF23A1L1A6 192 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 DEFB108AA8MXU0 73 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 AGPAT2O15120 278 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 FAM87AP0C7U9 286 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 IGHV3-43DP0DP04 118 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 CD40P25942 277 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 CCKARP32238 428 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 SULT1A2P50226 295 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 SELENOVP59797 346 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 LTC4SQ16873 150 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 MST1LQ2TV78 715 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 ZNF585BQ52M93 769 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 PRR30Q53SZ7 412 aaPredicted RBP6.34□□□□□ -1.4
IFT88-201ENST00000319980 FAM209AQ5JX71 171 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 ZNF808Q8N4W9 903 aaPredicted RBP6.34□□□□□ -1.4
IFT88-201ENST00000319980 TMEM252Q8N6L7 170 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 ZNRF1Q8ND25 227 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 SAT2Q96F10 170 aaPredicted RBP6.34□□□□□ -1.4
IFT88-201ENST00000319980 MEGF10Q96KG7 1140 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 MRPL37Q9BZE1 423 aaKnown RBP6.34□□□□□ -1.4
IFT88-201ENST00000319980 C11orf1Q9H5F2 150 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 TMEM231Q9H6L2 316 aa6.34□□□□□ -1.4
IFT88-201ENST00000319980 LYRM2Q9NU23 88 aaPredicted RBP6.34□□□□□ -1.4
IFT88-201ENST00000319980 LIN7CQ9NUP9 197 aaKnown RBP6.34□□□□□ -1.4
IFT88-201ENST00000319980 TLN1Q9Y490 2541 aaKnown RBP6.34□□□□□ -1.4
IFT88-201ENST00000319980 PLCE1Q9P212 2302 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 IGLV3-9A0A075B6K5 115 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 B8ZZF3 427 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 H3BP45 60 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 OR2B11Q5JQS5 317 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 FAM201AQ5SY85 155 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 UQCC3Q6UW78 93 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 ZGRF1Q86YA3 2104 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 ITLN1Q8WWA0 313 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 PLPPR2Q96GM1 343 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 SH3BGRL3Q9H299 93 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 MMP26Q9NRE1 261 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 FAM212BQ9NTI7 297 aaPredicted RBP6.33□□□□□ -1.4
IFT88-201ENST00000319980 CACNG5Q9UF02 275 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 PTPRQQ9UMZ3 2332 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 A0A1B0GU03 582 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 C16orf97H3BN30 126 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 ABCD4O14678 606 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 ZNF737O75373 536 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 IGKV1-5P01602 117 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 M6PRP20645 277 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 FHITP49789 147 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 C3orf36Q3SXR2 165 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 ATRAIDQ6UW56 229 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 Q6ZRG5 221 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 MRGPRGQ86SM5 289 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 ZNF645Q8N7E2 425 aa6.33□□□□□ -1.4
IFT88-201ENST00000319980 OR5C1Q8NGR4 320 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms