RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CD38P28907 300 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 NTF4P34130 210 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 FUT6P51993 359 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 RELQ04864 619 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-202ENST00000318266 COA6Q5JTJ3 125 aaKnown RBP8.23□□□□□ -1.09
PTPRA-202ENST00000318266 C20orf204Q6ZNR8 217 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 ASCL5Q7RTU5 278 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 PLXDC1Q8IUK5 500 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 PYGO2Q9BRQ0 406 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 DEFB126Q9BYW3 111 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 AKIRIN1Q9H9L7 192 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-202ENST00000318266 PARD6AQ9NPB6 346 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 CRIM1Q9NZV1 1036 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 PTRH2Q9Y3E5 179 aaKnown RBP8.23□□□□□ -1.09
PTPRA-202ENST00000318266 TRAPPC1Q9Y5R8 145 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 H0Y980 276 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 CLDN1O95832 211 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 IL3RAP26951 378 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 CCR5P51681 352 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 IGFBP7Q16270 282 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 SLC25A53Q5H9E4 307 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 C10orf128Q5T292 105 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 C1orf194Q5T5A4 169 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 ACSM6Q6P461 480 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 OR5D13Q8NGL4 314 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 PATZ1Q9HBE1 687 aaKnown RBP8.23□□□□□ -1.09
PTPRA-202ENST00000318266 PPIAL4AQ9Y536 164 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 R4GN57 208 aa8.23□□□□□ -1.09
PTPRA-202ENST00000318266 DUX1O43812 170 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 LILRA1O75019 489 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 TRAPPC6AO75865 159 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 ZFAND5O76080 213 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 HBG1P69891 147 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 HBG2P69892 147 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 PSG4Q00888 419 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 OR5I1Q13606 314 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 OR8B8Q15620 311 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 LRRC75BQ2VPJ9 315 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 ACOT6Q3I5F7 207 aaPredicted RBP8.22□□□□□ -1.09
PTPRA-202ENST00000318266 ARSJQ5FYB0 599 aaPredicted RBP8.22□□□□□ -1.09
PTPRA-202ENST00000318266 FAM27BQ5VT28 67 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 SLC23A3Q6PIS1 610 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 TGIF2LYQ8IUE0 185 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 TMEM54Q969K7 222 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 SPACA9Q96E40 222 aaPredicted RBP8.22□□□□□ -1.09
PTPRA-202ENST00000318266 TMEM204Q9BSN7 226 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 WDR61Q9GZS3 305 aaKnown RBP8.22□□□□□ -1.09
PTPRA-202ENST00000318266 PLSCR2Q9NRY7 297 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 OR1A1Q9P1Q5 309 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 CLEC18AA5D8T8 446 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 WDR1O75083 606 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 CCKARP32238 428 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 SLC38A11Q08AI6 406 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 SPINK9Q5DT21 86 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 ZIC4Q8N9L1 334 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 CLEC18CQ8NCF0 446 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 TAF15Q92804 592 aaKnown RBP eCLIP8.22□□□□□ -1.09
PTPRA-202ENST00000318266 ABHD14BQ96IU4 210 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 DERL1Q9BUN8 251 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 CACNA1DQ01668 2161 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 hCG_38984A0A1B0GV85 526 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 TMEM8BA6NDV4 472 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 KIAA1324LA8MWY0 1029 aaPredicted RBP8.22□□□□□ -1.09
PTPRA-202ENST00000318266 IGKV1-39P01597 117 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 IGKV1D-39P04432 117 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 PDLIM4P50479 330 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 TNFSF10P50591 281 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 HIST1H3AP68431 136 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 ASCL4Q6XD76 172 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 OR56B2PQ8NGI1 322 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 OR10J5Q8NHC4 309 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 OR6C1Q96RD1 312 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 IMMP2LQ96T52 175 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 SRXN1Q9BYN0 137 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 MANBALQ9NQG1 85 aa8.22□□□□□ -1.09
PTPRA-202ENST00000318266 DOCK7Q96N67 2140 aa8.21□□□□□ -1.09
PTPRA-202ENST00000318266 A0A0J9YW62 118 aa8.21□□□□□ -1.09
PTPRA-202ENST00000318266 IGHV3-64DA0A0J9YX35 117 aa8.21□□□□□ -1.09
PTPRA-202ENST00000318266 TMEM210A6NLX4 147 aa8.21□□□□□ -1.09
PTPRA-202ENST00000318266 C1QTNF9P0C862 333 aa8.21□□□□□ -1.09
PTPRA-202ENST00000318266 S100GP29377 79 aa8.21□□□□□ -1.09
PTPRA-202ENST00000318266 MPLP40238 635 aa8.21□□□□□ -1.09
PTPRA-202ENST00000318266 DCAF10Q5QP82 559 aa8.21□□□□□ -1.09
PTPRA-202ENST00000318266 OPN3Q9H1Y3 402 aaPredicted RBP8.21□□□□□ -1.09
PTPRA-202ENST00000318266 LMO7DNF2Z398 122 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 IGKV1-5P01602 117 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 EDN3P14138 238 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 OR10J1P30954 320 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 SERF2P84101 59 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 CEACAM16Q2WEN9 425 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 OR10G9Q8NGN4 311 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 OR10G7Q8NGN6 311 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 VN1R17PQ8TDU5 208 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 R3HDM4Q96D70 268 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 OR51B6Q9H340 312 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 RNF150Q9ULK6 438 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 CBY1Q9Y3M2 126 aa8.21□□□□□ -1.1
PTPRA-202ENST00000318266 KIR2DL5BA0A0G2JN68 375 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 KIR2DL5BA0A0G2JPC4 375 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms