RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 EGLN1Q9GZT9 426 aa17.32■□□□□ 0.36
TTC39C-202ENST00000317571 UFSP2Q9NUQ7 469 aa17.32■□□□□ 0.36
TTC39C-202ENST00000317571 CEACAM4O75871 244 aa17.32■□□□□ 0.36
TTC39C-202ENST00000317571 PTBP3O95758 552 aaKnown RBP17.32■□□□□ 0.36
TTC39C-202ENST00000317571 ACAA1P09110 424 aaPredicted RBP17.32■□□□□ 0.36
TTC39C-202ENST00000317571 PAX6P26367 422 aa17.32■□□□□ 0.36
TTC39C-202ENST00000317571 OR3A1P47881 315 aa17.32■□□□□ 0.36
TTC39C-202ENST00000317571 AESQ08117 197 aa17.32■□□□□ 0.36
TTC39C-202ENST00000317571 TMEM267Q0VDI3 215 aaPredicted RBP17.32■□□□□ 0.36
TTC39C-202ENST00000317571 C20orf24Q9BUV8 137 aa17.32■□□□□ 0.36
TTC39C-202ENST00000317571 ZNF71Q9NQZ8 489 aaPredicted RBP17.32■□□□□ 0.36
TTC39C-202ENST00000317571 FBXO7Q9Y3I1 522 aa17.32■□□□□ 0.36
TTC39C-202ENST00000317571 WRBO00258 174 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 SLC25A6P12236 298 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 ZNF16P17020 682 aaPredicted RBP17.31■□□□□ 0.36
TTC39C-202ENST00000317571 S100GP29377 79 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 HOXC12P31275 282 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 ACP7Q6ZNF0 438 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 RBM7Q9Y580 266 aaKnown RBP17.31■□□□□ 0.36
TTC39C-202ENST00000317571 IGHV2OR16-5A0A0B4J2B6 119 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 C7orf77A4D0Y5 90 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 TXNL1O43396 289 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 BAXQ07812 192 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 SP5Q6BEB4 398 aaPredicted RBP17.31■□□□□ 0.36
TTC39C-202ENST00000317571 NBEAQ8NFP9 2946 aa17.31■□□□□ 0.36
TTC39C-202ENST00000317571 A6NLC8 198 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 DAOP14920 347 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 KITLGP21583 273 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 TPRX1Q8N7U7 411 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 OR52L2PQ8NGH6 319 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 LSM10Q969L4 123 aaKnown RBP17.3■□□□□ 0.36
TTC39C-202ENST00000317571 ISOC2Q96AB3 205 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 RARRES2Q99969 163 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 CXXC4Q9H2H0 198 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 RNF150Q9ULK6 438 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 HEATR1Q9H583 2144 aaKnown RBP17.3■□□□□ 0.36
TTC39C-202ENST00000317571 ZNF292O60281 2723 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 TIMM8AO60220 97 aaPredicted RBP17.3■□□□□ 0.36
TTC39C-202ENST00000317571 PTAFRP25105 342 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 RAB5BP61020 215 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 SNRPEP62304 92 aaKnown RBP17.3■□□□□ 0.36
TTC39C-202ENST00000317571 ARL16Q0P5N6 197 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 RPRMLQ8N4K4 120 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 CACNA1DQ01668 2161 aa17.3■□□□□ 0.36
TTC39C-202ENST00000317571 MGAQ8IWI9 3026 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 TMEM30CPA0ZSE6 113 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 M0R036 132 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 IAPPP10997 89 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 IGF2-ASQ6U949 168 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 HAPLN4Q86UW8 402 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 RAMP3O60896 148 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 MEOX2P50222 304 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 RPL30P62888 115 aaKnown RBP17.29■□□□□ 0.36
TTC39C-202ENST00000317571 RNASE11Q8TAA1 199 aaKnown RBP17.29■□□□□ 0.36
TTC39C-202ENST00000317571 ATP5SQ99766 215 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 AKAP13Q12802 2813 aa17.29■□□□□ 0.36
TTC39C-202ENST00000317571 USF3Q68DE3 2245 aa17.28■□□□□ 0.36
TTC39C-202ENST00000317571 IFNA4P05014 189 aa17.28■□□□□ 0.36
TTC39C-202ENST00000317571 EIF4EBP1Q13541 118 aaPredicted RBP17.28■□□□□ 0.36
TTC39C-202ENST00000317571 UMAD1C9J7I0 102 aa17.28■□□□□ 0.36
TTC39C-202ENST00000317571 EIF3GO75821 320 aaKnown RBP eCLIP17.28■□□□□ 0.36
TTC39C-202ENST00000317571 HBZP02008 142 aa17.28■□□□□ 0.36
TTC39C-202ENST00000317571 BRWD1-AS2P59051 145 aa17.28■□□□□ 0.36
TTC39C-202ENST00000317571 MRGPRDQ8TDS7 321 aa17.28■□□□□ 0.36
TTC39C-202ENST00000317571 LIN7CQ9NUP9 197 aaKnown RBP17.28■□□□□ 0.36
TTC39C-202ENST00000317571 AHRRA9YTQ3 701 aa17.27■□□□□ 0.36
TTC39C-202ENST00000317571 C1orf196B1AJZ1 125 aa17.27■□□□□ 0.36
TTC39C-202ENST00000317571 GLIPR1P48060 266 aa17.27■□□□□ 0.36
TTC39C-202ENST00000317571 SULT1A1P50225 295 aa17.27■□□□□ 0.36
TTC39C-202ENST00000317571 SLC35E4Q6ICL7 350 aa17.27■□□□□ 0.36
TTC39C-202ENST00000317571 LRP11Q86VZ4 500 aa17.27■□□□□ 0.36
TTC39C-202ENST00000317571 OR2D2Q9H210 308 aa17.27■□□□□ 0.36
TTC39C-202ENST00000317571 PROCRQ9UNN8 238 aa17.27■□□□□ 0.36
TTC39C-202ENST00000317571 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.27■□□□□ 0.35
TTC39C-202ENST00000317571 A0A1W2PPH5 198 aa17.27■□□□□ 0.35
TTC39C-202ENST00000317571 SYNGR2O43760 224 aa17.27■□□□□ 0.35
TTC39C-202ENST00000317571 CEACAM1P13688 526 aa17.27■□□□□ 0.35
TTC39C-202ENST00000317571 SPRNQ5BIV9 151 aa17.27■□□□□ 0.35
TTC39C-202ENST00000317571 BHLHA15Q7RTS1 189 aaPredicted RBP17.27■□□□□ 0.35
TTC39C-202ENST00000317571 RAB40CQ96S21 281 aa17.27■□□□□ 0.35
TTC39C-202ENST00000317571 DCTN5Q9BTE1 182 aa17.27■□□□□ 0.35
TTC39C-202ENST00000317571 SLC25A15Q9Y619 301 aa17.27■□□□□ 0.35
TTC39C-202ENST00000317571 OR5H1A6NKK0 313 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 TM4SF5O14894 197 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 MT-ND4LP03901 98 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 OR13C7P0DN81 318 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 EGR1P18146 543 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 SSTR5P35346 364 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 COL10A1Q03692 680 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 OR2B11Q5JQS5 317 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 MBNL2Q5VZF2 373 aaKnown RBP17.26■□□□□ 0.35
TTC39C-202ENST00000317571 KDF1Q8NAX2 398 aaPredicted RBP17.26■□□□□ 0.35
TTC39C-202ENST00000317571 OR13A1Q8NGR1 328 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 WSB1Q9Y6I7 421 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 CADP27708 2225 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 MBD3L4A6NDZ8 208 aaPredicted RBP17.26■□□□□ 0.35
TTC39C-202ENST00000317571 MBD3L3A6NE82 208 aaPredicted RBP17.26■□□□□ 0.35
TTC39C-202ENST00000317571 MBD3L5A6NJ08 208 aaPredicted RBP17.26■□□□□ 0.35
TTC39C-202ENST00000317571 GABRA2P47869 451 aa17.26■□□□□ 0.35
TTC39C-202ENST00000317571 LINC00205P59089 165 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms