RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 ZNF738Q8NE65 137 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 SARAFQ96BY9 339 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 C10orf35Q96D05 121 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 GMPPAQ96IJ6 420 aaPredicted RBP12.59□□□□□ -0.39
HOXA3-201ENST00000317201 PRRT1Q99946 306 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 CALHM2Q9HA72 323 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 SLC7A10Q9NS82 523 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 TAS2R4Q9NYW5 299 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 MSRB2Q9Y3D2 182 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 FAM186AA6NE01 2351 aa12.59□□□□□ -0.39
HOXA3-201ENST00000317201 B4GALT1P15291 398 aa12.58□□□□□ -0.39
HOXA3-201ENST00000317201 UBE2G2P60604 165 aa12.58□□□□□ -0.39
HOXA3-201ENST00000317201 PLXDC2Q6UX71 529 aa12.58□□□□□ -0.39
HOXA3-201ENST00000317201 MRPL52Q86TS9 123 aaKnown RBP12.58□□□□□ -0.39
HOXA3-201ENST00000317201 OR5D14Q8NGL3 314 aa12.58□□□□□ -0.39
HOXA3-201ENST00000317201 OR1F12Q8NHA8 337 aa12.58□□□□□ -0.39
HOXA3-201ENST00000317201 OR51E1Q8TCB6 317 aa12.58□□□□□ -0.39
HOXA3-201ENST00000317201 VAMP8Q9BV40 100 aa12.58□□□□□ -0.39
HOXA3-201ENST00000317201 CLCF1Q9UBD9 225 aa12.58□□□□□ -0.39
HOXA3-201ENST00000317201 SS18L1O75177 396 aaPredicted RBP12.58□□□□□ -0.4
HOXA3-201ENST00000317201 C1orf100Q5SVJ3 147 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 CLEC18BQ6UXF7 455 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 DPPA3Q6W0C5 159 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 ST6GALNAC3Q8NDV1 305 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 TMEM56Q96MV1 263 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 C20orf144Q9BQM9 153 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 SCNM1Q9BWG6 230 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 OR2H1Q9GZK4 316 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 ZNF391Q9UJN7 358 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 COX11Q9Y6N1 276 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 TMEM56-RWDD3S4R434 201 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
HOXA3-201ENST00000317201 M0R135 149 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 RAB11BQ15907 218 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 C3AR1Q16581 482 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 FAM57BQ71RH2 274 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 ZNF596Q8TC21 504 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 ZNF799Q96GE5 643 aa12.58□□□□□ -0.4
HOXA3-201ENST00000317201 A0A0A6YYH2 397 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 IGHV2-70DA0A0C4DH43 119 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 A6NJ64 397 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 ZNF32P17041 273 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 CDKN1AP38936 164 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 CALHM1Q8IU99 346 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 ZCCHC14Q8WYQ9 949 aaKnown RBP12.57□□□□□ -0.4
HOXA3-201ENST00000317201 FGGYQ96C11 551 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 GPR84Q9NQS5 396 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 ARR3P36575 388 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 RTN4RL2Q86UN3 420 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 PTX4Q96A99 478 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 OR10A2Q9H208 303 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 CNTRLQ7Z7A1 2325 aa12.57□□□□□ -0.4
HOXA3-201ENST00000317201 TNRC6AQ8NDV7 1962 aaKnown RBP12.56□□□□□ -0.4
HOXA3-201ENST00000317201 TNFSF12O43508 249 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 ZNF20P17024 532 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 RAB11AP62491 216 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 ARF1P84077 181 aaKnown RBP12.56□□□□□ -0.4
HOXA3-201ENST00000317201 PSG4Q00888 419 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 TRAPPC6BQ86SZ2 158 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 CHST4Q8NCG5 386 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 RBKSQ9H477 322 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 PPP5D1E7EU14 171 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 F5H5K5 113 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 LYL1P12980 280 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 GUSBP1Q15486 140 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 COA6Q5JTJ3 125 aaKnown RBP12.56□□□□□ -0.4
HOXA3-201ENST00000317201 ADAT3Q96EY9 351 aaPredicted RBP12.56□□□□□ -0.4
HOXA3-201ENST00000317201 C2orf50Q96LR7 162 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 TXN2Q99757 166 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 PCGF1Q9BSM1 259 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 SRD5A3Q9H8P0 318 aa12.56□□□□□ -0.4
HOXA3-201ENST00000317201 CGGBP1Q9UFW8 167 aaPredicted RBP12.56□□□□□ -0.4
HOXA3-201ENST00000317201 GNG7O60262 68 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 SAP30O75446 220 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 TOMM40O96008 361 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 IFNA21P01568 189 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 COMPP49747 757 aaPredicted RBP12.55□□□□□ -0.4
HOXA3-201ENST00000317201 ICAM4Q14773 271 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 TMEM183BQ1AE95 376 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 VWA1Q6PCB0 445 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 POC1AQ8NBT0 407 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 LAMTOR2Q9Y2Q5 125 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 CEP250Q9BV73 2442 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 TRBV24-1A0A075B6N3 115 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 DHRS3O75911 302 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 PMPCAQ10713 525 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 Q6ZN92 141 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 TAAR6Q96RI8 345 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 RHBDD3Q9Y3P4 386 aa12.55□□□□□ -0.4
HOXA3-201ENST00000317201 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
HOXA3-201ENST00000317201 XRCC2O43543 280 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 LMX1BO60663 402 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 OPN1MWP04001 364 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 PET100P0DJ07 73 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 OPN1MW2P0DN77 364 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 OPN1MW3P0DN78 364 aa12.54□□□□□ -0.4
HOXA3-201ENST00000317201 IAH1Q2TAA2 248 aaPredicted RBP12.54□□□□□ -0.4
HOXA3-201ENST00000317201 SPACA3Q8IXA5 215 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms