RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 IL1F10Q8WWZ1 152 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 PBDC1Q9BVG4 233 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 TRAPPC2LQ9UL33 140 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 DIDO1Q9BTC0 2240 aaKnown RBP11.96□□□□□ -0.5
VRK3-201ENST00000316763 A0A1B0GU03 582 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 IQCF6A8MYZ5 107 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 UMAD1C9J7I0 102 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 SIRPB1O00241 398 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 TNFSF12O43508 249 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 HEXAP06865 529 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 ERVK11-1P61568 191 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 CLINT1Q14677 625 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 OR8G1Q15617 311 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 GUK1Q16774 197 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 ZNF497Q6ZNH5 498 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 CBLN2Q8IUK8 224 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 SLC25A40Q8TBP6 338 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 RND1Q92730 232 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 AKR1E2Q96JD6 320 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 GPHA2Q96T91 129 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 MAGT1Q9H0U3 335 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 SH3BGRL3Q9H299 93 aa11.96□□□□□ -0.5
VRK3-201ENST00000316763 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.95□□□□□ -0.5
VRK3-201ENST00000316763 SLC33A1O00400 549 aaPredicted RBP11.95□□□□□ -0.5
VRK3-201ENST00000316763 AGFG2O95081 481 aa11.95□□□□□ -0.5
VRK3-201ENST00000316763 OR2H2O95918 312 aa11.95□□□□□ -0.5
VRK3-201ENST00000316763 PGA5P0DJD9 388 aa11.95□□□□□ -0.5
VRK3-201ENST00000316763 TMEM182Q6ZP80 229 aaPredicted RBP11.95□□□□□ -0.5
VRK3-201ENST00000316763 OR1J1Q8NGS3 322 aa11.95□□□□□ -0.5
VRK3-201ENST00000316763 RNASE11Q8TAA1 199 aaKnown RBP11.95□□□□□ -0.5
VRK3-201ENST00000316763 S100PBPQ96BU1 408 aa11.95□□□□□ -0.5
VRK3-201ENST00000316763 EIF5A2Q9GZV4 153 aaKnown RBP11.95□□□□□ -0.5
VRK3-201ENST00000316763 RBM7Q9Y580 266 aaKnown RBP11.95□□□□□ -0.5
VRK3-201ENST00000316763 CHST1O43916 411 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 PPT1P50897 306 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 ZNF146Q15072 292 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 C4orf17Q53FE4 359 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 WDR86Q86TI4 376 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 OR51H1Q8NH63 302 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 PLPPR1Q8TBJ4 325 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 GNPNAT1Q96EK6 184 aaPredicted RBP11.94□□□□□ -0.5
VRK3-201ENST00000316763 ELOVL5Q9NYP7 299 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 MLXQ9UH92 298 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 PRELID1Q9Y255 219 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 FAM157AC9JC47 383 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 ACAA1P09110 424 aaPredicted RBP11.94□□□□□ -0.5
VRK3-201ENST00000316763 CECR9P0C854 216 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 OMGP23515 440 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 RPL23AP62750 156 aaKnown RBP11.94□□□□□ -0.5
VRK3-201ENST00000316763 ADORA2A-AS1P86434 159 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 HFEQ30201 348 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 C3orf36Q3SXR2 165 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 OR5C1Q8NGR4 320 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 FAM213BQ8TBF2 198 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 TAAR3PQ9P1P4 343 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 OR1A1Q9P1Q5 309 aa11.94□□□□□ -0.5
VRK3-201ENST00000316763 C9JQL5 133 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.93□□□□□ -0.5
VRK3-201ENST00000316763 K7N7A8 449 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 CDIPTO14735 213 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 PSG2P11465 335 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 TUBG1P23258 451 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 ATP6V0CP27449 155 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 ASCL1P50553 236 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 DYNLT3P51808 116 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 ERVS71-1P61550 626 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 PSG7Q13046 419 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 ZNF154Q13106 437 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 STX12Q86Y82 276 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 OR10Z1Q8NGY1 313 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
VRK3-201ENST00000316763 GPR146Q96CH1 333 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 TUBG2Q9NRH3 451 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 SMCO4Q9NRQ5 59 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 KCNIP1Q9NZI2 227 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 PRELID3BQ9Y3B1 194 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 WIPI2Q9Y4P8 454 aa11.93□□□□□ -0.5
VRK3-201ENST00000316763 IGHV1-18A0A0C4DH31 117 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 A0A1B0GW64 132 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 DFFBO76075 338 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 GRPP07492 148 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 EPHA1P21709 976 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 CCKARP32238 428 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 CD200P41217 278 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 FHITP49789 147 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 OR8G5Q8NG78 346 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 SMDT1Q9H4I9 107 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 LIN7CQ9NUP9 197 aaKnown RBP11.92□□□□□ -0.5
VRK3-201ENST00000316763 KCNS2Q9ULS6 477 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 BTBD17A6NE02 478 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 RNF212BA8MTL3 300 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 CST7O76096 145 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 TESK1Q15569 626 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 KLF14Q8TD94 323 aaPredicted RBP11.92□□□□□ -0.5
VRK3-201ENST00000316763 MUCL1Q96DR8 90 aa11.92□□□□□ -0.5
VRK3-201ENST00000316763 MBNL3Q9NUK0 354 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms