RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 LPAR2Q9HBW0 351 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 GPR35Q9HC97 309 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 HSPB7Q9UBY9 170 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1D-13A0A0B4J2D9 117 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 CCDC85CA6NKD9 419 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1-13P0DP09 117 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 IRF2P14316 349 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 SUMO1P63165 101 aaKnown RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 ARSJQ5FYB0 599 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-201ENST00000316707 PCSK4Q6UW60 755 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 COLCA1Q6ZS62 124 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 C19orf35Q6ZS72 473 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 PNKDQ8N490 385 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 PKIBQ9C010 78 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 MSL2Q9HCI7 577 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 CDC42EP3Q9UKI2 254 aa4.08□□□□□ -1.76
PTPN13-201ENST00000316707 IGHV3-20A0A0C4DH32 117 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 OR4A8P0C604 315 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 PMCHL1Q16048 86 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 DMRTC1Q5HYR2 192 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 WDR74Q6RFH5 385 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 MRPL21Q7Z2W9 205 aaKnown RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 WDFY1Q8IWB7 410 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 OR10G3Q8NGC4 313 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 OR5B3Q8NH48 314 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 DTD1Q8TEA8 209 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 C1QTNF5Q9BXJ0 243 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 TRAV39A0A0B4J263 110 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 E9PLN8 166 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 J3QW42 95 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 OR5G3P0C626 314 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 TMEM267Q0VDI3 215 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 RAB31Q13636 194 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 CEACAM21Q3KPI0 293 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 PET117Q6UWS5 81 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ZDHHC23Q8IYP9 409 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 SLC35E1Q96K37 410 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 A0A1W2PR77 199 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 C5orf63A6NC05 138 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 IL6RP08887 468 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 SCTP09683 121 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 IAPPP10997 89 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 GZMHP20718 246 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 WDR31Q8NA23 367 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 OR56B2PQ8NGI1 322 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 DYRK2Q92630 601 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 NAT6Q93015 286 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 DIRC2Q96SL1 478 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 VSIRQ9H7M9 311 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 SLC45A2Q9UMX9 530 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 WDR83OSQ9Y284 106 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 RFNGQ9Y644 331 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ARL2-SNX15V9GYD0 113 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 SHISA8B8ZZ34 492 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 CA3P07451 260 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 CD55P08174 381 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 PSG2P11465 335 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 PTGDSP41222 190 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 HTD2P86397 168 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 PLP2Q04941 152 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF324BQ6AW86 544 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ELOVL1Q9BW60 279 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 SNAI3Q3KNW1 292 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 FFAR4Q5NUL3 377 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 OR8G2PQ6IF36 304 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF738Q8NE65 137 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ORAOV1Q8WV07 137 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 RPP25Q9BUL9 199 aaKnown RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF703Q9H7S9 590 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 SLC25A22Q9H936 323 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 SAA2-SAA4A0A096LPE2 208 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 UBE2L5PA0A1B0GUS4 154 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 C9JCJ5 164 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 HLA-DQA1P01909 254 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 JMJD7P0C870 316 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 GLB1P16278 677 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 NXPH1P58417 271 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 PSG4Q00888 419 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 KRTAP27-1Q3LI81 207 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 BRICD5Q6PL45 260 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 CALHM1Q8IU99 346 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 BADQ92934 168 aa4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF552Q9H707 407 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 KIF26AQ9ULI4 1882 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 ARID1BQ8NFD5 2236 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-201ENST00000316707 MLNRO43193 412 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 WDR1O75083 606 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 SRD5A2P31213 254 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 HNRNPA3P51991 378 aaKnown RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 RPS20P60866 119 aaKnown RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 PDLIM3Q53GG5 364 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-201ENST00000316707 LEMD1Q68G75 181 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 FAM58AQ8N1B3 248 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 ZIC4Q8N9L1 334 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 NINJ1Q92982 152 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 SLC35D1Q9NTN3 355 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 ELOVL5Q9NYP7 299 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 POLDIP2Q9Y2S7 368 aa4.06□□□□□ -1.76
PTPN13-201ENST00000316707 ANKRD30BLA7E2S9 258 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms