RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SERPINA2P20848 420 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 OR3A1P47881 315 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 NKX6-1P78426 367 aaPredicted RBP6.46□□□□□ -1.37
CNOT4-201ENST00000315544 PAX8Q06710 450 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 AIMP2Q13155 320 aaKnown RBP6.46□□□□□ -1.37
CNOT4-201ENST00000315544 ALKBH6Q3KRA9 238 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 DCAF10Q5QP82 559 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF585AQ6P3V2 769 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 BOLLQ8N9W6 283 aaKnown RBP6.46□□□□□ -1.37
CNOT4-201ENST00000315544 AKR7LQ8NHP1 331 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 ST6GALNAC5Q9BVH7 336 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 hCG_1809904A0A1W2PP81 198 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 A0A1W2PR64 198 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 A0A1W2PRV1 198 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 F5H0A9 414 aaPredicted RBP6.46□□□□□ -1.38
CNOT4-201ENST00000315544 H3BQ15 152 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 DUTP33316 252 aaKnown RBP6.46□□□□□ -1.38
CNOT4-201ENST00000315544 CD80P33681 288 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 ISOC2Q96AB3 205 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 METTL9Q9H1A3 318 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 PLK3Q9H4B4 646 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 SMCO4Q9NRQ5 59 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 OR2W1Q9Y3N9 320 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 UMAD1C9J7I0 102 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 K7EN84 100 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 NUPR1O60356 82 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 GOSR1O95249 250 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 GZMBP10144 247 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 SELLP14151 372 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 B4GALT1P15291 398 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 LOXP28300 417 aaPredicted RBP6.46□□□□□ -1.38
CNOT4-201ENST00000315544 DYNLT3P51808 116 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 PRR20EP86478 221 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 PRR20CP86479 221 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 PRR20DP86480 221 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 PRR20BP86481 221 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 PRR20AP86496 221 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 TSC22D1Q15714 1073 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 SLC22A25Q6T423 547 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 CPNE4Q96A23 557 aaPredicted RBP6.46□□□□□ -1.38
CNOT4-201ENST00000315544 C17orf77Q96MU5 243 aa6.46□□□□□ -1.38
CNOT4-201ENST00000315544 IGKV1OR2-108A0A075B7D4 117 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 BTBD17A6NE02 478 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 FAM24AA6NFZ4 105 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 FAM25EA8MYX2 175 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 PLATP00750 562 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 CELA3BP08861 270 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 DLX6P56179 175 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 YPEL3P61236 119 aaPredicted RBP6.45□□□□□ -1.38
CNOT4-201ENST00000315544 HLA-DRB3P79483 266 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 FAM189A2Q15884 450 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 PRAMEF20Q5VT98 475 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 IGF2BP2-AS1Q96M15 143 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 TTTY12Q9BZ98 90 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 ZNF160Q9HCG1 818 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 CCL28Q9NRJ3 127 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 MED6O75586 246 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 HTR3BO95264 441 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 LINC00869P0C866 280 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 DAOP14920 347 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 SSR4P51571 173 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 RAB14P61106 215 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 BLOC1S1P78537 153 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 GNMTQ14749 295 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 C17orf58Q2M2W7 97 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 FAM120AOSQ5T036 256 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 PPP1R35Q8TAP8 253 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 FRZBQ92765 325 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 HIST1H2BLQ99880 126 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 URM1Q9BTM9 101 aaKnown RBP6.45□□□□□ -1.38
CNOT4-201ENST00000315544 PLEKHF2Q9H8W4 249 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 SDHAF3Q9NRP4 125 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 SOHLH2Q9NX45 425 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 CACNA1CQ13936 2221 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 LYSTQ99698 3801 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 TGIF2-C20orf24A0A0A6YYL0 155 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 OR13C7P0DN81 318 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 CEACAM16Q2WEN9 425 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 CYB561D1Q8N8Q1 229 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 IMMP2LQ96T52 175 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 CHODLQ9H9P2 273 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 CSMD3Q7Z407 3707 aa6.45□□□□□ -1.38
CNOT4-201ENST00000315544 A8MWP6 167 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 AP4M1O00189 453 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 ZNF728P0DKX0 622 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 IGHV1-2P23083 117 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 ITGA3P26006 1051 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 CSNK2A1P68400 391 aaPredicted RBP6.44□□□□□ -1.38
CNOT4-201ENST00000315544 RUNX1Q01196 453 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 TGIF2LYQ8IUE0 185 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 CD177Q8N6Q3 437 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 CSNK2A3Q8NEV1 391 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 OR10H5Q8NGA6 315 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 THAP3Q8WTV1 239 aaPredicted RBP6.44□□□□□ -1.38
CNOT4-201ENST00000315544 URB1-AS1Q96HZ7 61 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 ALKBH3Q96Q83 286 aaPredicted RBP6.44□□□□□ -1.38
CNOT4-201ENST00000315544 CRB3Q9BUF7 120 aa6.44□□□□□ -1.38
CNOT4-201ENST00000315544 SLC25A31Q9H0C2 315 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms