RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 F6UZH7 168 aa11.66□□□□□ -0.54
DDX54-202ENST00000314045 IL18BPO95998 194 aa11.66□□□□□ -0.54
DDX54-202ENST00000314045 MMP7P09237 267 aaPredicted RBP11.66□□□□□ -0.54
DDX54-202ENST00000314045 APOBEC3AP31941 199 aaPredicted RBP11.66□□□□□ -0.54
DDX54-202ENST00000314045 G6PCP35575 357 aa11.66□□□□□ -0.54
DDX54-202ENST00000314045 CD200P41217 278 aa11.66□□□□□ -0.54
DDX54-202ENST00000314045 GPHA2Q96T91 129 aa11.66□□□□□ -0.54
DDX54-202ENST00000314045 DNAH12Q6ZR08 3092 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 NUDT19A8MXV4 375 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 FAM157AC9JC47 383 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 E9PLN8 166 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 NDUFA2O43678 99 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 THBS3P49746 956 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 HIST3H3Q16695 136 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 SMUG1Q53HV7 270 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 ZNF787Q6DD87 383 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 ZNRF1Q8ND25 227 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 STARD4Q96DR4 205 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 VKORC1Q9BQB6 163 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 GNB4Q9HAV0 340 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 IQCF6A8MYZ5 107 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 OR7C2O60412 319 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 SLC25A6P12236 298 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 REG1BP48304 166 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 LGALSLQ3ZCW2 172 aaPredicted RBP11.65□□□□□ -0.54
DDX54-202ENST00000314045 C9orf62Q8N4C0 152 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 GFI1Q99684 422 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 ABHD14AQ9BUJ0 271 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 KIAA2026Q5HYC2 2103 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 H0YL77 283 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 RAB29O14966 203 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 CLLU1Q5K131 121 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 GCSAMQ8N6F7 178 aa11.65□□□□□ -0.54
DDX54-202ENST00000314045 NOTCH2Q04721 2471 aa11.65□□□□□ -0.55
DDX54-202ENST00000314045 PQLC2LA1A4F0 135 aa11.65□□□□□ -0.55
DDX54-202ENST00000314045 K7N7A8 449 aa11.65□□□□□ -0.55
DDX54-202ENST00000314045 IFNL4K9M1U5 179 aa11.65□□□□□ -0.55
DDX54-202ENST00000314045 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.55
DDX54-202ENST00000314045 HARBI1Q96MB7 349 aa11.65□□□□□ -0.55
DDX54-202ENST00000314045 C5orf66Q9H5L9 145 aa11.65□□□□□ -0.55
DDX54-202ENST00000314045 HES4Q9HCC6 221 aa11.65□□□□□ -0.55
DDX54-202ENST00000314045 CREBBPQ92793 2442 aa11.65□□□□□ -0.55
DDX54-202ENST00000314045 PCDH15Q96QU1 1955 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 A0A1B0GU03 582 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 P2RY4P51582 365 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 TAS2R45P59539 299 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 FRZBQ92765 325 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 FLYWCH2Q96CP2 140 aaKnown RBP11.64□□□□□ -0.55
DDX54-202ENST00000314045 RRASP10301 218 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 P2RX3P56373 397 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 FAM201AQ5SY85 155 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 CMTM2Q8TAZ6 248 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 SLC25A28Q96A46 364 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 NEIL1Q96FI4 390 aaPredicted RBP11.64□□□□□ -0.55
DDX54-202ENST00000314045 MED9Q9NWA0 146 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 CLCF1Q9UBD9 225 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 FBLN5Q9UBX5 448 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 MED13Q9UHV7 2174 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 IGHV1-69-2A0A0G2JMI3 117 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 P2RY1P47900 373 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 SLC2A8Q9NY64 477 aa11.64□□□□□ -0.55
DDX54-202ENST00000314045 C5orf63A6NC05 138 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 ACP7Q6ZNF0 438 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 PNRC2Q9NPJ4 139 aaKnown RBP11.63□□□□□ -0.55
DDX54-202ENST00000314045 OR1A1Q9P1Q5 309 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 IL36RNQ9UBH0 155 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 KPTNQ9Y664 436 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 WNT5AP41221 380 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 KHDC1LQ5JSQ8 128 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 PXDC1Q5TGL8 231 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 OR13D1Q8NGV5 346 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 RNASE6Q93091 150 aaKnown RBP11.63□□□□□ -0.55
DDX54-202ENST00000314045 TMEM230Q96A57 120 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 TMEM222Q9H0R3 208 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 NAT1P18440 290 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 BRS3P32247 399 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 OPRK1P41145 380 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 NHLH1Q02575 133 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 DOLPP1Q86YN1 238 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 POC1AQ8NBT0 407 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 OR10Z1Q8NGY1 313 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 RXFP4Q8TDU9 374 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 SOSTQ9BQB4 213 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 PCGF1Q9BSM1 259 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 DUXBA0A1W2PPF3 345 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 MUC1P15941 1255 aaPredicted RBP11.63□□□□□ -0.55
DDX54-202ENST00000314045 ADIRFQ15847 76 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 TNXAQ16473 311 aa11.63□□□□□ -0.55
DDX54-202ENST00000314045 PAQR4Q8N4S7 273 aaPredicted RBP11.63□□□□□ -0.55
DDX54-202ENST00000314045 PTPRQQ9UMZ3 2332 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 RPS10-NUDT3A0A1W2PQS6 291 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 COX6B1P14854 86 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 FAM209AQ5JX71 171 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 C14orf79Q96F83 325 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 PPP1R14DQ9NXH3 145 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 H0Y980 276 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms