RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR5AS1Q8N127 324 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 OR52E5Q8NH55 327 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 OR10D3Q8NH80 312 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 APOBEC4Q8WW27 367 aaKnown RBP7.69□□□□□ -1.18
COL6A5-202ENST00000312481 MACROD1Q9BQ69 325 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 OR1P1Q8NH06 330 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 STARD4Q96DR4 205 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 GNRHR2Q96P88 292 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 CDX2Q99626 313 aaPredicted RBP7.69□□□□□ -1.18
COL6A5-202ENST00000312481 NAV3Q8IVL0 2385 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 UBE2CO00762 179 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 CD1BP29016 333 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 ATP5L2Q7Z4Y8 100 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 POC1AQ8NBT0 407 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 DTD1Q8TEA8 209 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 ADIPOR1Q96A54 375 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 RASL10BQ96S79 203 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 C20orf24Q9BUV8 137 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 FCGR3AP08637 254 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF32P17041 273 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 FHITP49789 147 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 PTTG1IPP53801 180 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 SLC25A47Q6Q0C1 308 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 TCF24Q7RTU0 167 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 R3HDM4Q96D70 268 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 EMC6Q9BV81 110 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 HIF1ANQ9NWT6 349 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 EFSO43281 561 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 FGF5P12034 268 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 HTR1DP28221 377 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 LGALS7P47929 136 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 CD226Q15762 336 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 FBXW9Q5XUX1 488 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 TCF23Q7RTU1 214 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 BOLLQ8N9W6 283 aaKnown RBP7.68□□□□□ -1.18
COL6A5-202ENST00000312481 UCP1P25874 307 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 NEUROG1Q92886 237 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 FAM234AQ9H0X4 552 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 FOXD3Q9UJU5 478 aaPredicted RBP7.68□□□□□ -1.18
COL6A5-202ENST00000312481 CBR1P16152 277 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 BEND2Q8NDZ0 799 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 ABHD3Q8WU67 409 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 APCSP02743 223 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 TAS2R60P59551 318 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 DLK2Q6UY11 383 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 SCNM1Q9BWG6 230 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 TMEM56-RWDD3S4R434 201 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 C17orf51A8MQB3 221 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 MGST3O14880 152 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 KRTCAP3Q53RY4 240 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 PARM1Q6UWI2 310 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 SNX22Q96L94 193 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 GOLT1BQ9Y3E0 138 aa7.68□□□□□ -1.18
COL6A5-202ENST00000312481 CST7O76096 145 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 CEACAM1P13688 526 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 TCL1AP56279 114 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 UBE2L3P68036 154 aaKnown RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 PSG9Q00887 426 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF721Q8TF20 911 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 FBXO4Q9UKT5 387 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 ZIC2O95409 532 aaPredicted RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 ATP6V0CP27449 155 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 LPAR6P43657 344 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 OR10AG1Q8NH19 301 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 OR2D2Q9H210 308 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 C6orf106Q9H6K1 298 aaPredicted RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 RABAC1Q9UI14 185 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 TRAV8-7A0A075B6U6 113 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 IGLV1-36A0A0B4J1U3 117 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 AHRRA9YTQ3 701 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 FABP2P12104 132 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 CXCL2P19875 107 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 TGFBR1P36897 503 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 UCNP55089 124 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 STARD6P59095 220 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 SLC35E4Q6ICL7 350 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 PTCRAQ6ISU1 281 aaPredicted RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 WASHC3Q9Y3C0 194 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 LIPGQ9Y5X9 500 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 HYAL3O43820 417 aaPredicted RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 PRICKLE3O43900 615 aaPredicted RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 CHST1O43916 411 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 S1PR2O95136 353 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 OPRK1P41145 380 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 RPS16P62249 146 aaKnown RBP7.67□□□□□ -1.18
COL6A5-202ENST00000312481 OR5I1Q13606 314 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 TRIM61Q5EBN2 209 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 PRSS3P2Q8NHM4 247 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 FAM206AQ9NX38 181 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 NAGKQ9UJ70 344 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 LOXL2Q9Y4K0 774 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 K7N7A8 449 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 AMY1AP04745 511 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 ERV3-1Q14264 604 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 LANCL2Q9NS86 450 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 A0A0B4J293 547 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 NUDT3O95989 172 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 PGFP49763 221 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 VEGFBP49765 207 aa7.67□□□□□ -1.18
COL6A5-202ENST00000312481 NUBP1P53384 320 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms