RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 CGB7P0DN87 165 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 RCVRNP35243 200 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 PAX5Q02548 391 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 NDUFA5Q16718 116 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 PNLIPRP3Q17RR3 467 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 CLEC9AQ6UXN8 241 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 LHX4Q969G2 390 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 TBX15Q96SF7 602 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 SUCNR1Q9BXA5 334 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 MBNL3Q9NUK0 354 aaKnown RBP14.88□□□□□ -0.03
HMGA1-201ENST00000311487 OPN4Q9UHM6 478 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 BOLA1Q9Y3E2 137 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 MTORP42345 2549 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 M0QYG6 137 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 CD5LO43866 347 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 MMP9P14780 707 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 GNMTQ14749 295 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 CR1LQ2VPA4 569 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 CORO2AQ92828 525 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 TINAGL1Q9GZM7 467 aaPredicted RBP14.87□□□□□ -0.03
HMGA1-201ENST00000311487 SIRPDQ9H106 197 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 IFT46Q9NQC8 304 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 PLSCR3Q9NRY6 295 aa14.87□□□□□ -0.03
HMGA1-201ENST00000311487 SOX21Q9Y651 276 aaPredicted RBP14.87□□□□□ -0.03
HMGA1-201ENST00000311487 IGKV1-6A0A0C4DH72 117 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 ZNF736B4DX44 427 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-201ENST00000311487 BET1O15155 118 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 ZNF735P0CB33 412 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 IGHV1-8P0DP01 117 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 ANXA3P12429 323 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 GZMHP20718 246 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 PAX6P26367 422 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 ARL6IP1Q15041 203 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 CDK10Q15131 360 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 ZNF880Q6PDB4 577 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 SNAPC3Q92966 411 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 GAL3ST2Q9H3Q3 398 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 OR1A1Q9P1Q5 309 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 SLC23A1Q9UHI7 598 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 ZNF729A6NN14 1252 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-201ENST00000311487 C17orf98A8MV24 154 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 SDCBPO00560 298 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-201ENST00000311487 FABP7O15540 132 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 VSIG10L2P0DP72 767 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 GNG10P50151 68 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 HERPUD1Q15011 391 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 C22orf15Q8WYQ4 148 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 RIMS4Q9H426 269 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-201ENST00000311487 LPAR3Q9UBY5 353 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 KCNS2Q9ULS6 477 aa14.86□□□□□ -0.03
HMGA1-201ENST00000311487 MXRA5Q9NR99 2828 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 A0A1W2PPH5 198 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 TRDCB7Z8K6 153 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 SPINT2O43291 252 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 IGHV4-38-2P0DP08 117 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 PPP1CCP36873 323 aaKnown RBP14.85□□□□□ -0.03
HMGA1-201ENST00000311487 C6orf183Q5T699 404 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 ZNF626Q68DY1 528 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 BRD3OSQ6XYD6 125 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 ZFAND1Q8TCF1 268 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 OCSTAMPQ9BR26 566 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 PARP12Q9H0J9 701 aaKnown RBP14.85□□□□□ -0.03
HMGA1-201ENST00000311487 OR2S2Q9NQN1 319 aa14.85□□□□□ -0.03
HMGA1-201ENST00000311487 TRBV6-6A0A0A6YYG2 114 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 TRAV40A0A0B4J280 105 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 PMP2P02689 132 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 AMY2AP04746 511 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 HLA-DRB3P79483 266 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 RUSC1-AS1Q66K80 236 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 GALMQ96C23 342 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 METTL8Q9H825 291 aaKnown RBP14.84□□□□□ -0.03
HMGA1-201ENST00000311487 GPN1Q9HCN4 374 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-201ENST00000311487 TAS2R3Q9NYW6 316 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 IDI2-AS1Q9NZ38 188 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 GNG12Q9UBI6 72 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 KPTNQ9Y664 436 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 HIVEP2P31629 2446 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 SNRPGP15A8MWD9 76 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 NPIPB11E5RHQ5 1161 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 RNASEK-C17orf49H0YIS7 233 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 RGS13O14921 159 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 RLN1P04808 185 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 HOXB4P17483 251 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-201ENST00000311487 DTYMKP23919 212 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 HMGN3Q15651 99 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 HEPN1Q6WQI6 88 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 IDO2Q6ZQW0 420 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 HOGA1Q86XE5 327 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 TNFRSF14Q92956 283 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 SLC6A7Q99884 636 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 ZNF286AQ9HBT8 521 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 ZNF69Q9UC07 566 aa14.84□□□□□ -0.03
HMGA1-201ENST00000311487 M0R1W7 72 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 CREBL2O60519 120 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-201ENST00000311487 LOXL3P58215 753 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 MEF2DQ14814 521 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 Q5BKY6 102 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 FAM120AOSQ5T036 256 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 HCP5Q6MZN7 132 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 OR52B4Q8NGK2 314 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms