RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 NEUROG1Q92886 237 aa17.71■□□□□ 0.43
ATG4D-201ENST00000309469 PLEKHA2Q9HB19 425 aa17.71■□□□□ 0.43
ATG4D-201ENST00000309469 ZC4H2Q9NQZ6 224 aa17.71■□□□□ 0.43
ATG4D-201ENST00000309469 POMT1Q9Y6A1 747 aa17.71■□□□□ 0.43
ATG4D-201ENST00000309469 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.7■□□□□ 0.42
ATG4D-201ENST00000309469 MUC1P15941 1255 aaPredicted RBP17.7■□□□□ 0.42
ATG4D-201ENST00000309469 FAM209AQ5JX71 171 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 TEX36Q5VZQ5 186 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 EGLN1Q9GZT9 426 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 OR2D2Q9H210 308 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 NCOR1P1Q9H4R4 102 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 PLEKHF2Q9H8W4 249 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 SDHAF2Q9NX18 166 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 DCAF16Q9NXF7 216 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 A0A1B0GW55 424 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 LRRC30A6NM36 301 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 DUX4L2P0CJ85 424 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 DUX4L3P0CJ86 424 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 DUX4L4P0CJ87 422 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 DUX4L5P0CJ88 424 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 DUX4L6P0CJ89 424 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 DUX4L7P0CJ90 424 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 GRNP28799 593 aaKnown RBP17.7■□□□□ 0.42
ATG4D-201ENST00000309469 EDDM3BP56851 147 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 REG4Q9BYZ8 158 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 LIN7CQ9NUP9 197 aaKnown RBP17.7■□□□□ 0.42
ATG4D-201ENST00000309469 DUX4Q9UBX2 424 aa17.7■□□□□ 0.42
ATG4D-201ENST00000309469 ARID1AO14497 2285 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 IGHV3-43A0A0B4J1X8 118 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 MFSD2BA6NFX1 497 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 RNF212BA8MTL3 300 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 IGHV3-43DP0DP04 118 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 SELLP14151 372 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 ZNF16P17020 682 aaPredicted RBP17.69■□□□□ 0.42
ATG4D-201ENST00000309469 GAFA1Q96PS6 74 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 ZNF665Q9H7R5 613 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 ZZEF1O43149 2961 aa17.69■□□□□ 0.42
ATG4D-201ENST00000309469 TAAR5O14804 337 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 GYPAP02724 150 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 APOBEC3AP31941 199 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-201ENST00000309469 NKX2-1P43699 371 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-201ENST00000309469 CDSNQ15517 529 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 MSMO1Q15800 293 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 ZNF788Q6ZQV5 615 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 BAP18Q8IXM2 172 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 C14orf79Q96F83 325 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 LRRC46Q96FV0 321 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 CCL13Q99616 98 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 SAP30LQ9HAJ7 183 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 OR6C3Q9NZP0 311 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 RCL1Q9Y2P8 373 aaKnown RBP17.68■□□□□ 0.42
ATG4D-201ENST00000309469 ZNF585BQ52M93 769 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 DUX4L9Q6RFH8 374 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-201ENST00000309469 DMBX1Q8NFW5 382 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 CA5BP1Q8WTZ4 195 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 FAM234AQ9H0X4 552 aa17.68■□□□□ 0.42
ATG4D-201ENST00000309469 POLEQ07864 2286 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 DEFB108AA8MXU0 73 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 IGKV1-39P01597 117 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 IGKV1D-39P04432 117 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 P2RY1P47900 373 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 EIF4EBP1Q13541 118 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-201ENST00000309469 LTC4SQ16873 150 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 GPR146Q96CH1 333 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 C5orf30Q96GV9 206 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 ABHD14BQ96IU4 210 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 NCOR2Q9Y618 2525 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 PCNX1Q96RV3 2341 aa17.67■□□□□ 0.42
ATG4D-201ENST00000309469 CGB3P0DN86 165 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 CGB7P0DN87 165 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 EFNB3Q15768 340 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 MST1LQ2TV78 715 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 CXorf66Q5JRM2 361 aaPredicted RBP17.66■□□□□ 0.42
ATG4D-201ENST00000309469 ZNF808Q8N4W9 903 aaPredicted RBP17.66■□□□□ 0.42
ATG4D-201ENST00000309469 MS4A5Q9H3V2 200 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 DYNLRB1Q9NP97 96 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 KCNJ16Q9NPI9 418 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 JPT1Q9UK76 154 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 SESN1Q9Y6P5 492 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 A0A0G2JRQ6 117 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 F2RL2O00254 374 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 PLAUP00749 431 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 SLC25A6P12236 298 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 GPR157Q5UAW9 335 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 LSM10Q969L4 123 aaKnown RBP17.66■□□□□ 0.42
ATG4D-201ENST00000309469 C11orf1Q9H5F2 150 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 GNG12Q9UBI6 72 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 RNF115Q9Y4L5 304 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 PLCE1Q9P212 2302 aa17.66■□□□□ 0.42
ATG4D-201ENST00000309469 A0A1B0GU03 582 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 B9A039 149 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 LGALS8O00214 317 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 SIGLEC5O15389 551 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 GPR137BO60478 399 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 TMEM33P57088 247 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 POLR2GP62487 172 aaKnown RBP eCLIP17.65■□□□□ 0.42
ATG4D-201ENST00000309469 ID3Q02535 119 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 FAM216BQ8N7L0 139 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 EDARADDQ8WWZ3 215 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 AGMATQ9BSE5 352 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms