RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 TAF15Q92804 592 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRIM35-201ENST00000305364 CTXND1A0A1B0GTU2 59 aa11.21□□□□□ -0.62
TRIM35-201ENST00000305364 C5orf49A4QMS7 147 aa11.21□□□□□ -0.62
TRIM35-201ENST00000305364 KIAA1324LA8MWY0 1029 aaPredicted RBP11.21□□□□□ -0.62
TRIM35-201ENST00000305364 EDDM3BP56851 147 aa11.21□□□□□ -0.62
TRIM35-201ENST00000305364 ID3Q02535 119 aa11.21□□□□□ -0.62
TRIM35-201ENST00000305364 ZDHHC23Q8IYP9 409 aa11.21□□□□□ -0.62
TRIM35-201ENST00000305364 SCRT1Q9BWW7 348 aa11.21□□□□□ -0.62
TRIM35-201ENST00000305364 H0Y980 276 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 FCN1O00602 326 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 CDC34P49427 236 aaPredicted RBP11.2□□□□□ -0.62
TRIM35-201ENST00000305364 HNRNPA3P51991 378 aaKnown RBP11.2□□□□□ -0.62
TRIM35-201ENST00000305364 C11orf42Q8N5U0 333 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
TRIM35-201ENST00000305364 PRDX4Q13162 271 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 CATR1Q13166 79 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 HLA-BQ31612 363 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 OR5AU1Q8NGC0 362 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 OR5D13Q8NGL4 314 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 TMEM56Q96MV1 263 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 UHRF2Q96PU4 802 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 RASL10BQ96S79 203 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 MANBALQ9NQG1 85 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 OR2W1Q9Y3N9 320 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 TMEM56-RWDD3S4R434 201 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 IGKV1D-13A0A0B4J2D9 117 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 IGKV1-13P0DP09 117 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 ANOS1P23352 680 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 UCP1P25874 307 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 RND2P52198 227 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 BORCS7Q96B45 105 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 RIMS4Q9H426 269 aaPredicted RBP11.2□□□□□ -0.62
TRIM35-201ENST00000305364 PNRC2Q9NPJ4 139 aaKnown RBP11.2□□□□□ -0.62
TRIM35-201ENST00000305364 MPLP40238 635 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 ETFRF1Q6IPR1 90 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 POC1BQ8TC44 478 aa11.2□□□□□ -0.62
TRIM35-201ENST00000305364 ZNF837Q96EG3 531 aaPredicted RBP11.2□□□□□ -0.62
TRIM35-201ENST00000305364 CD33P20138 364 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 LTC4SQ16873 150 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 FAM27BQ5VT28 67 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 H2BFWTQ7Z2G1 175 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 TMEM204Q9BSN7 226 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 PLEKHA3Q9HB20 300 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 COL5A1-AS1Q5SY13 56 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 CALHM1Q8IU99 346 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
TRIM35-201ENST00000305364 OPN3Q9H1Y3 402 aaPredicted RBP11.19□□□□□ -0.62
TRIM35-201ENST00000305364 NDUFB4O95168 129 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 TMEM50AO95807 157 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 SRP14P37108 136 aaKnown RBP11.19□□□□□ -0.62
TRIM35-201ENST00000305364 AMTP48728 403 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 SSR4P51571 173 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 SYT13Q7L8C5 426 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 OR6C3Q9NZP0 311 aa11.19□□□□□ -0.62
TRIM35-201ENST00000305364 IGKV1-12A0A0C4DH73 117 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 VSTM5A8MXK1 200 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 C5orf67F2Z3F1 127 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 IGKV1D-12P01611 117 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 COX5BP10606 129 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 CD82P27701 267 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 COTL1Q14019 142 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 ARSJQ5FYB0 599 aaPredicted RBP11.18□□□□□ -0.62
TRIM35-201ENST00000305364 PHYHD1Q5SRE7 291 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 Q6ZN92 141 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 TIPARPQ7Z3E1 657 aaKnown RBP11.18□□□□□ -0.62
TRIM35-201ENST00000305364 TMEM147Q9BVK8 224 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 HEYLQ9NQ87 328 aaPredicted RBP11.18□□□□□ -0.62
TRIM35-201ENST00000305364 ZNF391Q9UJN7 358 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 TEX38Q6PEX7 206 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 OR51G1Q8NGK1 321 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 ZNF488Q96MN9 340 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 DLEU1O43261 78 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 DCAF12Q5T6F0 453 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 TECTBQ96PL2 329 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 PSMG3Q9BT73 122 aaPredicted RBP11.18□□□□□ -0.62
TRIM35-201ENST00000305364 WDR61Q9GZS3 305 aaKnown RBP11.18□□□□□ -0.62
TRIM35-201ENST00000305364 FAM234AQ9H0X4 552 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 NAT8BQ9UHF3 227 aa11.18□□□□□ -0.62
TRIM35-201ENST00000305364 TMEM250H0YL14 139 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 CEACAM1P13688 526 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 GDF1P27539 372 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 THBS3P49746 956 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 TNFSF10P50591 281 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 MRPL49Q13405 166 aaKnown RBP11.17□□□□□ -0.62
TRIM35-201ENST00000305364 KCNMB1Q16558 191 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 CLN8Q9UBY8 286 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 NXPH2O95156 264 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 MT-CO2P00403 227 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 SFTPCP11686 197 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 CEACAM6P40199 344 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 UBALD2Q8IYN6 164 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 FAM58AQ8N1B3 248 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 OR10G8Q8NGN5 311 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 TMEM208Q9BTX3 173 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 ICE1Q9Y2F5 2266 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
TRIM35-201ENST00000305364 PSG4Q00888 419 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms