RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SH3BGRL2Q9UJC5 107 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 IGKV1-39P01597 117 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 IGKV1D-39P04432 117 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 EWSR1Q01844 656 aaKnown RBP eCLIP16.2■□□□□ 0.18
HOXC4-201ENST00000303406 CXorf66Q5JRM2 361 aaPredicted RBP16.2■□□□□ 0.18
HOXC4-201ENST00000303406 STPG2Q8N412 459 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 MARC2Q969Z3 335 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 GINS3Q9BRX5 216 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 FAM234AQ9H0X4 552 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 OR2D2Q9H210 308 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 COA4Q9NYJ1 87 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 OR6C3Q9NZP0 311 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 NUP50Q9UKX7 468 aa16.2■□□□□ 0.18
HOXC4-201ENST00000303406 F2RL2O00254 374 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 ITGB1BP1O14713 200 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 ATG12O94817 140 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 TFF1P04155 84 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 SEC11BP0C7V7 166 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 MUC1P15941 1255 aaPredicted RBP16.19■□□□□ 0.18
HOXC4-201ENST00000303406 TNFRSF1AP19438 455 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 ASCL1P50553 236 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 BSPH1Q075Z2 132 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 ADIPOQQ15848 244 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 TEX36Q5VZQ5 186 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 STUMQ69YW2 141 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 BOLLQ8N9W6 283 aaKnown RBP16.19■□□□□ 0.18
HOXC4-201ENST00000303406 C14orf79Q96F83 325 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 TAS2R3Q9NYW6 316 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 RNF115Q9Y4L5 304 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 A0A0G2JRQ6 117 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 KIAA1324LA8MWY0 1029 aaPredicted RBP16.19■□□□□ 0.18
HOXC4-201ENST00000303406 FAM90A26D6RGX4 464 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 TEX46H3BTG2 121 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 WRBO00258 174 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 YPEL1O60688 119 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 SSTR5P35346 364 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 CA7P43166 264 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 BLOC1S1P78537 153 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 FBXL19-AS1Q494R0 122 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 IL34Q6ZMJ4 242 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 ST6GALNAC3Q8NDV1 305 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 OR1S2Q8NGQ3 325 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 YPEL2Q96QA6 119 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 RAB40CQ96S21 281 aa16.19■□□□□ 0.18
HOXC4-201ENST00000303406 ANKRD11Q6UB99 2663 aaPredicted RBP16.18■□□□□ 0.18
HOXC4-201ENST00000303406 IGHV3OR15-7A0A075B7D8 119 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 C17orf100A8MU93 164 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 SSSCA1O60232 199 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 IGKV1-5P01602 117 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 OR4A8P0C604 315 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 CGB3P0DN86 165 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 CGB7P0DN87 165 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 IRF2P14316 349 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 CD80P33681 288 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 PPP1CCP36873 323 aaKnown RBP16.18■□□□□ 0.18
HOXC4-201ENST00000303406 EDDM3AQ14507 147 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 TMEM30BQ3MIR4 351 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 FAM209AQ5JX71 171 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 TMEM252Q8N6L7 170 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 RNASE11Q8TAA1 199 aaKnown RBP16.18■□□□□ 0.18
HOXC4-201ENST00000303406 BSCL2Q96G97 398 aaPredicted RBP16.18■□□□□ 0.18
HOXC4-201ENST00000303406 LINC00052Q96N35 136 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 HSD17B10Q99714 261 aaKnown RBP16.18■□□□□ 0.18
HOXC4-201ENST00000303406 SMIM3Q9BZL3 60 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 WFDC1Q9HC57 220 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 MMP26Q9NRE1 261 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 MMP24Q9Y5R2 645 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 SPENQ96T58 3664 aaKnown RBP16.18■□□□□ 0.18
HOXC4-201ENST00000303406 ACACAQ13085 2346 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 ASPMQ8IZT6 3477 aa16.18■□□□□ 0.18
HOXC4-201ENST00000303406 FAM24AA6NFZ4 105 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 AKR1C2P52895 323 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 ZNF266Q14584 549 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 TPRX1Q8N7U7 411 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 C5orf30Q96GV9 206 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 ZNF665Q9H7R5 613 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 PARP11Q9NR21 331 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 LAMP3Q9UQV4 416 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 ZGRF1Q86YA3 2104 aa16.17■□□□□ 0.18
HOXC4-201ENST00000303406 TRGV8A0A0C4DH27 118 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 IGSF23A1L1A6 192 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 ZNF705EA8MWA4 302 aaPredicted RBP16.16■□□□□ 0.18
HOXC4-201ENST00000303406 SPP1P10451 314 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 LPAR6P43657 344 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 RAB5CP51148 216 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 CAV2P51636 162 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 RPL23AP62750 156 aaKnown RBP16.16■□□□□ 0.18
HOXC4-201ENST00000303406 NHLH2Q02577 135 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 MST1LQ2TV78 715 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 NCMAPQ5T1S8 102 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 ZNF788Q6ZQV5 615 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 WFIKKN1Q96NZ8 548 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 AGMATQ9BSE5 352 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 ESRP2Q9H6T0 727 aaKnown RBP16.16■□□□□ 0.18
HOXC4-201ENST00000303406 CACNG5Q9UF02 275 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 GAB2Q9UQC2 676 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 WSB1Q9Y6I7 421 aa16.16■□□□□ 0.18
HOXC4-201ENST00000303406 LRRC30A6NM36 301 aa16.15■□□□□ 0.18
HOXC4-201ENST00000303406 CHST1O43916 411 aa16.15■□□□□ 0.18
HOXC4-201ENST00000303406 P0C879 139 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms