RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ZNF345Q14585 488 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 KCNRGQ8N5I3 272 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 OR2D2Q9H210 308 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 TRAV38-1A0A0B4J264 116 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 RNF212BA8MTL3 300 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 B8ZZF3 427 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 H0Y980 276 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 C18orf12Q96KH6 178 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 ACACBO00763 2458 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 DEFB108AA8MXU0 73 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 CD55P08174 381 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 ADH4P08319 380 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 LDLRAD3Q86YD5 345 aa12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 RBPMSQ93062 196 aaKnown RBP12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 LIN7CQ9NUP9 197 aaKnown RBP12.12□□□□□ -0.47
SHCBP1-201ENST00000303383 TMPRSS2O15393 492 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 KCNAB3O43448 404 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 PLAUP00749 431 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 ZNF808Q8N4W9 903 aaPredicted RBP12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 CNTNAP3BQ96NU0 1288 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 CNTNAP3Q9BZ76 1288 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 PARP12Q9H0J9 701 aaKnown RBP12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 OR5AC2Q9NZP5 309 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 NDUFB7P17568 137 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 GNMTQ14749 295 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 DMRTC2Q8IXT2 367 aaPredicted RBP12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 OR1S1Q8NH92 325 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
SHCBP1-201ENST00000303383 TRGV10A0A0A0MS01 117 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 BCL2L11O43521 198 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 CFDP00746 253 aaPredicted RBP12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 SELLP14151 372 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 AKR1C2P52895 323 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 ALKAL2Q6UX46 152 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 MUC15Q8N387 334 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 EDARADDQ8WWZ3 215 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 RNF126Q9BV68 326 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 PPIAL4EA0A075B759 164 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 PPIAL4DF5H284 164 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 PPIAL4FP0DN26 164 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 UCP1P25874 307 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 UBA52P62987 128 aaKnown RBP12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 RELQ04864 619 aaPredicted RBP12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 STUMQ69YW2 141 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 TGIF2LYQ8IUE0 185 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 SELENOHQ8IZQ5 122 aaKnown RBP12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 C14orf79Q96F83 325 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 PPIAL4AQ9Y536 164 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 RNF222A6NCQ9 220 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 H0YIZ8 118 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 LGALS8O00214 317 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 EPHA1P21709 976 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 CATR1Q13166 79 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 DRAM1Q8N682 238 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 SDSLQ96GA7 329 aa12.1□□□□□ -0.47
SHCBP1-201ENST00000303383 TRIM77I1YAP6 450 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 K7EPK0 472 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 WRBO00258 174 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 ST8SIA3O43173 380 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 CDS2O95674 445 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 VDAC1P21796 283 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 FAM71E2Q8N5Q1 922 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 FAM216BQ8N7L0 139 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 RRNAD1Q96FB5 475 aaKnown RBP12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 TMEM106BQ9NUM4 274 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 PSG11Q9UQ72 335 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 TMEM238LA0A1B0GVL6 79 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 DUXBA0A1W2PPF3 345 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 ADAM20O43506 726 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 CDSNQ15517 529 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 PLA2G5P39877 138 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 ZBTB34Q8NCN2 500 aa12.09□□□□□ -0.47
SHCBP1-201ENST00000303383 OMGP23515 440 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 NKX2-1P43699 371 aaPredicted RBP12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 HTD2P86397 168 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 PAX5Q02548 391 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 OR52M1Q8NGK5 317 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 PCNPQ8WW12 178 aaKnown RBP12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 GAFA1Q96PS6 74 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 CALYQ9NYX4 217 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 GNLYP22749 145 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 EFNB3Q15768 340 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 HFEQ30201 348 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 ESCO2Q56NI9 601 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 IL22RA2Q969J5 263 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 FAM234AQ9H0X4 552 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 DSCAMO60469 2012 aa12.08□□□□□ -0.48
SHCBP1-201ENST00000303383 E5RGE8 158 aa12.07□□□□□ -0.48
SHCBP1-201ENST00000303383 DEDDO75618 318 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms