RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 IGHEP01854 428 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 COX6A1P12074 109 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 HIST1H3AP68431 136 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 BTNL8Q6UX41 500 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 OIT3Q8WWZ8 545 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 SMIM8Q96KF7 97 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 RBKSQ9H477 322 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 MYOZ1Q9NP98 299 aaPredicted RBP11.42□□□□□ -0.58
CASC4-201ENST00000299957 KIAA1456Q9P272 454 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 IL17BQ9UHF5 180 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 CACNA1AO00555 2505 aa11.42□□□□□ -0.58
CASC4-201ENST00000299957 ALPK3Q96L96 1907 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 TRAV38-1A0A0B4J264 116 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 PMS2P1A4D2B8 440 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 KIAA1324LA8MWY0 1029 aaPredicted RBP11.41□□□□□ -0.58
CASC4-201ENST00000299957 IGHV3-48P01763 117 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 ERVFC1-1P60608 527 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 TXN2Q99757 166 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 TMEM9BQ9NQ34 198 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.41□□□□□ -0.58
CASC4-201ENST00000299957 COL4A3Q01955 1670 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 LOC390937A0A1W2PQ73 354 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 TRGC1P0CF51 173 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 FAM157CP0CG43 387 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 HOXA4Q00056 320 aaPredicted RBP11.41□□□□□ -0.58
CASC4-201ENST00000299957 GAMTQ14353 236 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 S1PR3Q99500 378 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 GGACTQ9BVM4 153 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 GPR87Q9BY21 358 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 ANGPTL4Q9BY76 406 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 KLF13Q9Y2Y9 288 aaPredicted RBP11.41□□□□□ -0.58
CASC4-201ENST00000299957 PIGBOS1A0A0B4J2F0 54 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 C11orf94C9JXX5 98 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 CD55P08174 381 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 RPS23P62266 143 aaKnown RBP11.41□□□□□ -0.58
CASC4-201ENST00000299957 DTD1Q8TEA8 209 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 SAP25Q8TEE9 199 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
CASC4-201ENST00000299957 TMEM30CPA0ZSE6 113 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 SEC14L6B5MCN3 397 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 FGF16O43320 207 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 MPLP40238 635 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.58
CASC4-201ENST00000299957 SOX8P57073 446 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 DEFB109BQ30KR1 87 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 ACOT6Q3I5F7 207 aaPredicted RBP11.4□□□□□ -0.58
CASC4-201ENST00000299957 C16orf82Q7Z2V1 217 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 NUFIP2Q7Z417 695 aaKnown RBP11.4□□□□□ -0.58
CASC4-201ENST00000299957 TMEM178AQ8NBL3 297 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 LRRC29Q8WV35 223 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 TMEM18Q96B42 140 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 THADAQ6YHU6 1953 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 MT-CO3P00414 261 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 DCTN5Q9BTE1 182 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 DLL3Q9NYJ7 618 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 CLCF1Q9UBD9 225 aa11.4□□□□□ -0.58
CASC4-201ENST00000299957 COLCA2A8K830 154 aa11.4□□□□□ -0.59
CASC4-201ENST00000299957 IFI6P09912 130 aa11.4□□□□□ -0.59
CASC4-201ENST00000299957 FGFRL1Q8N441 504 aa11.4□□□□□ -0.59
CASC4-201ENST00000299957 TMEM251Q8N6I4 163 aa11.4□□□□□ -0.59
CASC4-201ENST00000299957 OR2M7Q8NG81 312 aa11.4□□□□□ -0.59
CASC4-201ENST00000299957 OR10A7Q8NGE5 316 aa11.4□□□□□ -0.59
CASC4-201ENST00000299957 SIGLEC12Q96PQ1 595 aa11.4□□□□□ -0.59
CASC4-201ENST00000299957 SF3B5Q9BWJ5 86 aaKnown RBP11.4□□□□□ -0.59
CASC4-201ENST00000299957 PLXNA2O75051 1894 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 BCL2P10415 239 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 ZNF441Q8N8Z8 693 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
CASC4-201ENST00000299957 RPP30P78346 268 aaKnown RBP11.39□□□□□ -0.59
CASC4-201ENST00000299957 DBX2Q6ZNG2 339 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 OR2T10Q8NGZ9 312 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 MED13Q9UHV7 2174 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 YKT6O15498 198 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 OR2H2O95918 312 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 FGF12P61328 243 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 SPNS3Q6ZMD2 512 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 CARFQ8N187 725 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 Q8WTZ3 238 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 MS4A10Q96PG2 267 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 SZT2Q5T011 3432 aa11.39□□□□□ -0.59
CASC4-201ENST00000299957 TOX3O15405 576 aaPredicted RBP11.38□□□□□ -0.59
CASC4-201ENST00000299957 ZG16O60844 167 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 NDUFB4O95168 129 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 HAND1O96004 215 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 LINC00205P59089 165 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 GNB1P62873 340 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 HGFACQ04756 655 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 SSPNQ14714 243 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 ZNF718Q3SXZ3 478 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 ZNF766Q5HY98 468 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 ZNF385CQ66K41 422 aaPredicted RBP11.38□□□□□ -0.59
CASC4-201ENST00000299957 RND1Q92730 232 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 LIME1Q9H400 295 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 VSIRQ9H7M9 311 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 LYRM2Q9NU23 88 aaPredicted RBP11.38□□□□□ -0.59
CASC4-201ENST00000299957 VAX2Q9UIW0 290 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 A0A1B0GV90 55 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 UMODP07911 640 aa11.38□□□□□ -0.59
CASC4-201ENST00000299957 QRFPP83859 136 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms