RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 CMTM3Q96MX0 182 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 GPHA2Q96T91 129 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 CABLES2Q9BTV7 478 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 GFOD1Q9NXC2 390 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 EHFQ9NZC4 300 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 OR6C3Q9NZP0 311 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 GNG12Q9UBI6 72 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF69Q9UC07 566 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 SLC23A1Q9UHI7 598 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 RNF150Q9ULK6 438 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 SESN1Q9Y6P5 492 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 CSMD2Q7Z408 3487 aa5.28□□□□□ -1.56
DEPDC4-201ENST00000299185 KIAA2026Q5HYC2 2103 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 IGHV2-26A0A0B4J1V2 119 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 INAFM1C9JVW0 142 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 NPIPB11E5RHQ5 1161 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 GABARAPH6UMI1 98 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 ORC5O43913 435 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 CA11O75493 328 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 CD3DP04234 171 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 GLAP06280 429 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 IL7P13232 177 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 FPR2P25090 351 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 ETV6P41212 452 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 RANBP1P43487 201 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 OR3A3P47888 321 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 RFX2P48378 723 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 LOXL3P58215 753 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 LINC00205P59089 165 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 ARPC4P59998 168 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 SRSF3P84103 164 aaKnown RBP5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 PAX5Q02548 391 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 MEF2CQ06413 473 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 BAMBIQ13145 260 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 KLF9Q13886 244 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 RPL39P5Q59GN2 51 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 SPANXN2Q5MJ10 180 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 TRIQKQ629K1 86 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 CLEC9AQ6UXN8 241 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 TMEM17Q86X19 198 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 LYSMD2Q8IV50 215 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 Q8N402 240 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF439Q8NDP4 499 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 OR4C16Q8NGL9 310 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 OR5H2Q8NGV7 314 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 OR56B4Q8NH76 319 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 S100ZQ8WXG8 99 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 ABHD14BQ96IU4 210 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 IFI27L2Q9H2X8 130 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 SCPEP1Q9HB40 452 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 RDH8Q9NYR8 311 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 KCNIP1Q9NZI2 227 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 MTFP1Q9UDX5 166 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 ANXA10Q9UJ72 324 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 TBC1D24Q9ULP9 559 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 KCNS2Q9ULS6 477 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 PSG11Q9UQ72 335 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 UBE2J1Q9Y385 318 aaPredicted RBP5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 AUP1Q9Y679 476 aa5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 ANK3Q12955 4377 aaKnown RBP5.27□□□□□ -1.57
DEPDC4-201ENST00000299185 IGHV3-72A0A0B4J1Y9 119 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 A0A0U1RQK1 487 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 CENPVL3A0A0U1RRI6 287 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 FUOMA2VDF0 154 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ODF3BA8MYP8 253 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 M0R1W7 72 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 F2RL2O00254 374 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 SPINT2O43291 252 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 GSTZ1O43708 216 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ECDO95905 644 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 FSHBP01225 129 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ARG1P05089 322 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF735P0CB33 412 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 SPNP16150 400 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 NAT1P18440 290 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF134P52741 427 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF846Q147U1 533 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 CDK10Q15131 360 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 Q3ZCU0 254 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 CHRFAM7AQ494W8 412 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 FAM120AOSQ5T036 256 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 CD276Q5ZPR3 534 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF57Q68EA5 555 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 HEPN1Q6WQI6 88 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 GLDNQ6ZMI3 551 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 H1FOOQ8IZA3 346 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 KIR3DL3Q8N743 410 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 SYT8Q8NBV8 401 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 OR4P4Q8NGL7 312 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 FCAMRQ8WWV6 532 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 TAF15Q92804 592 aaKnown RBP eCLIP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 CORO2AQ92828 525 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 TOMM40LQ969M1 308 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 MRGPRFQ96AM1 343 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 UPRTQ96BW1 309 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 AJUBAQ96IF1 538 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 ZNF48Q96MX3 618 aaPredicted RBP5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 SLC6A7Q99884 636 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 GINS4Q9BRT9 223 aa5.26□□□□□ -1.57
DEPDC4-201ENST00000299185 THAP7Q9BT49 309 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms