RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 TMEM250H0YL14 139 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 IL4P05112 153 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 S100A7L2Q5SY68 101 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 CA10Q9NS85 328 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 KBTBD11-OT1A0A1B0GTJ5 212 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 MT-CO3P00414 261 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 SPANXN1Q5VSR9 72 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 RHOVQ96L33 236 aa4.88□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF815PA8K554 130 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 CTSDP07339 412 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 CTLA4P16410 223 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 GALNSP34059 522 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 KIR3DL2P43630 455 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 GUCA2BQ16661 112 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 GUSBP11Q6P575 273 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 TMUB1Q9BVT8 246 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 MRM2Q9UI43 246 aaKnown RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 PLXNB2O15031 1838 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 SLC25A17O43808 307 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 PATE4P0C8F1 98 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM50BP56557 158 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 SH2D5Q6ZV89 423 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 CALHM1Q8IU99 346 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF519Q8TB69 540 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 DYNLRB2Q8TF09 96 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 ASB5Q8WWX0 329 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 SOSTQ9BQB4 213 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 RCC1P18754 421 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 TMEM249Q2WGJ8 235 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 AMER3Q8N944 861 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 FAM222BQ8WU58 562 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 C10orf35Q96D05 121 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 NRIP2Q9BQI9 281 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 MIEN1Q9BRT3 115 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 R3HDMLQ9H3Y0 253 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 MEF2BQ02080 365 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 KRTCAP3Q53RY4 240 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 HIST1H4GQ99525 98 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 C2orf88Q9BSF0 95 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 FRRS1LQ9P0K9 344 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 PPP1CCP36873 323 aaKnown RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 RELBQ01201 579 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 SRSF4Q08170 494 aaKnown RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 MESTQ5EB52 335 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 RNFT1Q5M7Z0 435 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 BEND2Q8NDZ0 799 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 Q8WTZ3 238 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 CITED2Q99967 270 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 NKX2-6A6NCS4 301 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 MPDU1O75352 247 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 EIF3GO75821 320 aaKnown RBP eCLIP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 CCL28Q9NRJ3 127 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 HIGD1AQ9Y241 93 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 KIAA1217Q5T5P2 1943 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 TMIGD3P0DMS9 266 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 CA7P43166 264 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 MRPS11P82912 194 aaKnown RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 LDLRAD3Q86YD5 345 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 RARRES2Q99969 163 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 SSBP4Q9BWG4 385 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 PRNDQ9UKY0 176 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 C7orf71A4D174 169 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 F12P00748 615 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 LINC00596Q86U02 117 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 MRGPRFQ96AM1 343 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 PAXXQ9BUH6 204 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 WNK3Q9BYP7 1800 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 KCNE1BA0A087WTH5 132 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 NKX2-2O95096 273 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 TRGC2P03986 189 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 GABRG2P18507 467 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 OR10AC1Q8NH08 325 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 PTPMT1Q8WUK0 201 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 DMRTA2Q96SC8 542 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 UNC13CQ8NB66 2214 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 DNAJC13O75165 2243 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 PPYP01298 95 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 HIKESHIQ53FT3 197 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 VSTM2AQ8TAG5 236 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 UBR3Q6ZT12 1888 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 SPTY2D1-AS1A0A0U1RR47 76 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 LMO7DNF2Z398 122 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 CDC42EP2O14613 210 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 SOCS1O15524 211 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 PLAURQ03405 335 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 FAM53AQ6NSI3 398 aaPredicted RBP4.87□□□□□ -1.63
CPSF2-201ENST00000298875 IL36RNQ9UBH0 155 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 ZNF318Q5VUA4 2279 aa4.87□□□□□ -1.63
CPSF2-201ENST00000298875 TRAV38-1A0A0B4J264 116 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 Q6ZS52 159 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 LYZL2Q7Z4W2 148 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 OR8I2Q8N0Y5 310 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 PNKDQ8N490 385 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 OR10AG1Q8NH19 301 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ORAOV1Q8WV07 137 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 EAF1Q96JC9 268 aaPredicted RBP4.86□□□□□ -1.63
CPSF2-201ENST00000298875 LINC01549A6NIU2 74 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 PRR33A8MZF0 331 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 PRR35P0CG20 571 aa4.86□□□□□ -1.63
CPSF2-201ENST00000298875 ECSCRQ19T08 205 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms