RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 KIAA2026Q5HYC2 2103 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 ZNF664Q8N3J9 261 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 RPP25LQ8N5L8 163 aaKnown RBP8.66□□□□□ -1.02
CCDC36-201ENST00000296449 NECAP1Q8NC96 275 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 AGBL5Q8NDL9 886 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 OR51G1Q8NGK1 321 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 RDH5Q92781 318 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 ACY3Q96HD9 319 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 ZNF488Q96MN9 340 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 HIST1H2AAQ96QV6 131 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 PRDM6Q9NQX0 595 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 OR1A1Q9P1Q5 309 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 PRSS50Q9UI38 385 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 LAMP3Q9UQV4 416 aa8.66□□□□□ -1.02
CCDC36-201ENST00000296449 TNRC6AQ8NDV7 1962 aaKnown RBP8.65□□□□□ -1.02
CCDC36-201ENST00000296449 NCKAP5O14513 1909 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 TRIOBPQ9H2D6 2365 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 TRAV24A0A0B4J272 114 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 TMEM250H0YL14 139 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 KBTBD11O94819 623 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 MEF2BQ02080 365 aaPredicted RBP8.65□□□□□ -1.02
CCDC36-201ENST00000296449 TLE1Q04724 770 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 BSXQ3C1V8 233 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 MRPL21Q7Z2W9 205 aaKnown RBP8.65□□□□□ -1.02
CCDC36-201ENST00000296449 OR10V1Q8NGI7 309 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 OR1K1Q8NGR3 316 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 PSMF1Q92530 271 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 LHX4Q969G2 390 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 NDUFAF3Q9BU61 184 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 DUSP23Q9BVJ7 150 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 STRADBQ9C0K7 418 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 ZNF552Q9H707 407 aaPredicted RBP8.65□□□□□ -1.02
CCDC36-201ENST00000296449 TIMM9Q9Y5J7 89 aa8.65□□□□□ -1.02
CCDC36-201ENST00000296449 XKRY2A2RUG3 117 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 C5orf49A4QMS7 147 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 NPIPB11E5RHQ5 1161 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 SPINK2P20155 84 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 TUBG1P23258 451 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 RAB4BP61018 213 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 ERVS71-1P61550 626 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 RPL23P62829 140 aaKnown RBP8.65□□□□□ -1.03
CCDC36-201ENST00000296449 P2RY6Q15077 328 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 WIPI1Q5MNZ9 446 aaPredicted RBP8.65□□□□□ -1.03
CCDC36-201ENST00000296449 IL1F10Q8WWZ1 152 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 TAF15Q92804 592 aaKnown RBP eCLIP8.65□□□□□ -1.03
CCDC36-201ENST00000296449 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.03
CCDC36-201ENST00000296449 SLC39A9Q9NUM3 307 aa8.65□□□□□ -1.03
CCDC36-201ENST00000296449 UBE2L5PA0A1B0GUS4 154 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 LRRC3CA6NJW4 275 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 CYTIPO60759 359 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 GALR1P47211 349 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 FAM3BP58499 235 aaPredicted RBP8.64□□□□□ -1.03
CCDC36-201ENST00000296449 SPCS3P61009 180 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 ARF1P84077 181 aaKnown RBP8.64□□□□□ -1.03
CCDC36-201ENST00000296449 TESK1Q15569 626 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 SSX2Q16385 188 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 ZNF585BQ52M93 769 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 SPANXN5Q5MJ07 72 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 C9orf135Q5VTT2 229 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 TMEM170AQ8WVE7 144 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 SGCZQ96LD1 299 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 ELOVL1Q9BW60 279 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 PRRG4Q9BZD6 226 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 PPP1R3CQ9UQK1 317 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 A0A096LPE4 126 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 A0A1W2PPZ6 126 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 PPP5D1E7EU14 171 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 H7BYZ3 331 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.64□□□□□ -1.03
CCDC36-201ENST00000296449 DEGS1O15121 323 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 TRAPPC6AO75865 159 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 IL18BPO95998 194 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 P04436 131 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 SNRPCP09234 159 aaKnown RBP8.64□□□□□ -1.03
CCDC36-201ENST00000296449 SLC38A11Q08AI6 406 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 IL11RAQ14626 422 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 ZNF66Q6ZN08 573 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 OR5A2Q8NGI9 324 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 OR5B12Q96R08 314 aa8.64□□□□□ -1.03
CCDC36-201ENST00000296449 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
CCDC36-201ENST00000296449 FAM90A26D6RGX4 464 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 HMGB3O15347 200 aaKnown RBP8.63□□□□□ -1.03
CCDC36-201ENST00000296449 NGFP01138 241 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 RAC2P15153 192 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 APLNRP35414 380 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 HNF4GQ14541 408 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 RTP5Q14D33 572 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.63□□□□□ -1.03
CCDC36-201ENST00000296449 OR2Y1Q8NGV0 311 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 PCGF1Q9BSM1 259 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 PARLQ9H300 379 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 DLL3Q9NYJ7 618 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 TRAV39A0A0B4J263 110 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 ZNF503-AS2A6NEH8 195 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 HRASP01112 189 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 TYMSP04818 313 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 CLEC12BQ2HXU8 276 aa8.63□□□□□ -1.03
CCDC36-201ENST00000296449 OR8G2PQ6IF36 304 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms