RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 EDDM3AQ14507 147 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 CISD2Q8N5K1 135 aaKnown RBP11.75□□□□□ -0.53
NXF1-201ENST00000294172 TMEM252Q8N6L7 170 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 CLRN3Q8NCR9 226 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 PRR7Q8TB68 274 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 GINS3Q9BRX5 216 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 SLC25A31Q9H0C2 315 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 PARP11Q9NR21 331 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 PLCE1Q9P212 2302 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 PRELID1Q9Y255 219 aa11.75□□□□□ -0.53
NXF1-201ENST00000294172 CHD3Q12873 2000 aaKnown RBP11.74□□□□□ -0.53
NXF1-201ENST00000294172 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 SEC11BP0C7V7 166 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 EGR1P18146 543 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 PRDX2P32119 198 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 SSTR5P35346 364 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 KLF3P57682 345 aaPredicted RBP11.74□□□□□ -0.53
NXF1-201ENST00000294172 ZNF616Q08AN1 781 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 SPRNQ5BIV9 151 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 TMEM88Q6PEY1 159 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 Q6ZRM9 215 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 ZNF808Q8N4W9 903 aaPredicted RBP11.74□□□□□ -0.53
NXF1-201ENST00000294172 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 RFESDQ8TAC1 157 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 NINJ1Q92982 152 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 OR2D2Q9H210 308 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 LIN7CQ9NUP9 197 aaKnown RBP11.74□□□□□ -0.53
NXF1-201ENST00000294172 CACNG5Q9UF02 275 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 SH3BGRL2Q9UJC5 107 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 DIDO1Q9BTC0 2240 aaKnown RBP11.74□□□□□ -0.53
NXF1-201ENST00000294172 A0A1B0GU03 582 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 H3BP45 60 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 C1QL1O75973 258 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 F12P00748 615 aaPredicted RBP11.74□□□□□ -0.53
NXF1-201ENST00000294172 PRH1P02810 166 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 SPP1P10451 314 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 CEACAM8P31997 349 aaPredicted RBP11.74□□□□□ -0.53
NXF1-201ENST00000294172 PPP1CCP36873 323 aaKnown RBP11.74□□□□□ -0.53
NXF1-201ENST00000294172 FHITP49789 147 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 BTNL8Q6UX41 500 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 C22orf34Q6ZV56 151 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 ABHD14BQ96IU4 210 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 OR2V2Q96R30 315 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 UQCC1Q9NVA1 299 aa11.74□□□□□ -0.53
NXF1-201ENST00000294172 PCNX1Q96RV3 2341 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 ZGRF1Q86YA3 2104 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 IGHV3OR15-7A0A075B7D8 119 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 MED19A0JLT2 244 aaPredicted RBP11.73□□□□□ -0.53
NXF1-201ENST00000294172 IFNL4K9M1U5 179 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 TSPAN9O75954 239 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 MUC1P15941 1255 aaPredicted RBP11.73□□□□□ -0.53
NXF1-201ENST00000294172 GLRXP35754 106 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 F2RL1P55085 397 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 LTC4SQ16873 150 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 OR2B11Q5JQS5 317 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 MOGAT3Q86VF5 341 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 DCTN5Q9BTE1 182 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 RNF115Q9Y4L5 304 aa11.73□□□□□ -0.53
NXF1-201ENST00000294172 A0A1B0GWJ7 208 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 A8MXE2 369 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 DANCRP0C864 163 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 CD200P41217 278 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 CAMLGP49069 296 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 DYNLT3P51808 116 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 TMEM182Q6ZP80 229 aaPredicted RBP11.72□□□□□ -0.53
NXF1-201ENST00000294172 ZNF645Q8N7E2 425 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 RFNGQ9Y644 331 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 SMG1Q96Q15 3661 aaKnown RBP11.72□□□□□ -0.53
NXF1-201ENST00000294172 PIGBOS1A0A0B4J2F0 54 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 DEFB108AA8MXU0 73 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 PRRG2O14669 202 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 PITX3O75364 302 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 NKX6-1P78426 367 aaPredicted RBP11.72□□□□□ -0.53
NXF1-201ENST00000294172 ZNF266Q14584 549 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 DOLPP1Q86YN1 238 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 AIFM2Q9BRQ8 373 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 USF3Q68DE3 2245 aa11.72□□□□□ -0.53
NXF1-201ENST00000294172 IGKV1D-17A0A075B6S4 117 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 TSPAN15O95858 294 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 CD80P33681 288 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 PAX9P55771 341 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 MIDNQ504T8 468 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 C10orf91Q5T1B1 145 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 BTNL3Q6UXE8 466 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 SPACA3Q8IXA5 215 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 ODF3L1Q8IXM7 274 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 SCNM1Q9BWG6 230 aa11.71□□□□□ -0.53
NXF1-201ENST00000294172 CARHSP1Q9Y2V2 147 aaKnown RBP11.71□□□□□ -0.53
NXF1-201ENST00000294172 RNF212BA8MTL3 300 aa11.71□□□□□ -0.54
NXF1-201ENST00000294172 SRRM5B3KS81 715 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms