RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 MMDQ15546 238 aa19.72■□□□□ 0.75
U2AF1-201ENST00000291552 RBM48Q5RL73 367 aaKnown RBP19.72■□□□□ 0.75
U2AF1-201ENST00000291552 C6orf201Q7Z4U5 140 aa19.72■□□□□ 0.75
U2AF1-201ENST00000291552 PHYHIPQ92561 330 aa19.72■□□□□ 0.75
U2AF1-201ENST00000291552 KCTD7Q96MP8 289 aa19.72■□□□□ 0.75
U2AF1-201ENST00000291552 MND1Q9BWT6 205 aa19.72■□□□□ 0.75
U2AF1-201ENST00000291552 ZNF107Q9UII5 783 aaPredicted RBP19.72■□□□□ 0.75
U2AF1-201ENST00000291552 TENM3Q9P273 2699 aa19.72■□□□□ 0.75
U2AF1-201ENST00000291552 CD37P11049 281 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 PSMB8P28062 276 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 HTR2CP28335 458 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 RAB25P57735 213 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 ACTBP60709 375 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 QRFPP83859 136 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 KIR2DS1Q14954 304 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 LY6G6FQ5SQ64 297 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 ZNF833PQ6ZTB9 187 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 MS4A15Q8N5U1 240 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 OR8U1Q8NH10 309 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 MYOZ3Q8TDC0 251 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 FAAP24Q9BTP7 215 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 TMEM59Q9BXS4 323 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 IFI27L2Q9H2X8 130 aa19.71■□□□□ 0.75
U2AF1-201ENST00000291552 SAA2-SAA4A0A096LPE2 208 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 A0A0A6YYD4 124 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 ANKRD65E5RJM6 399 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 YPEL1O60688 119 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 SAA2P0DJI9 122 aaPredicted RBP19.7■□□□□ 0.74
U2AF1-201ENST00000291552 VDAC1P21796 283 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 LUMP51884 338 aaPredicted RBP19.7■□□□□ 0.74
U2AF1-201ENST00000291552 IRF3Q14653 427 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 VAX1Q5SQQ9 334 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 SVOPQ8N4V2 548 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 NEDD4LQ96PU5 975 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 YPEL2Q96QA6 119 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 TM2D1Q9BX74 207 aa19.7■□□□□ 0.74
U2AF1-201ENST00000291552 SLC22A1O15245 554 aa19.69■□□□□ 0.74
U2AF1-201ENST00000291552 NAPSAO96009 420 aa19.69■□□□□ 0.74
U2AF1-201ENST00000291552 FHL3Q13643 280 aa19.69■□□□□ 0.74
U2AF1-201ENST00000291552 GLT8D1Q68CQ7 371 aa19.69■□□□□ 0.74
U2AF1-201ENST00000291552 ZNF880Q6PDB4 577 aa19.69■□□□□ 0.74
U2AF1-201ENST00000291552 C4orf3Q8WVX3 66 aa19.69■□□□□ 0.74
U2AF1-201ENST00000291552 GFI1Q99684 422 aa19.69■□□□□ 0.74
U2AF1-201ENST00000291552 B9D2Q9BPU9 175 aa19.69■□□□□ 0.74
U2AF1-201ENST00000291552 PARP12Q9H0J9 701 aaKnown RBP19.69■□□□□ 0.74
U2AF1-201ENST00000291552 NKX1-2Q9UD57 310 aaPredicted RBP19.69■□□□□ 0.74
U2AF1-201ENST00000291552 TMEM14DPA8MWL7 114 aa19.68■□□□□ 0.74
U2AF1-201ENST00000291552 PTGES3LE9PB15 166 aa19.68■□□□□ 0.74
U2AF1-201ENST00000291552 UCHL1P09936 223 aa19.68■□□□□ 0.74
U2AF1-201ENST00000291552 PPIFP30405 207 aaKnown RBP19.68■□□□□ 0.74
U2AF1-201ENST00000291552 KIAA0141Q14154 515 aaPredicted RBP19.68■□□□□ 0.74
U2AF1-201ENST00000291552 SPHARQ15513 63 aa19.68■□□□□ 0.74
U2AF1-201ENST00000291552 CEACAM19Q7Z692 300 aa19.68■□□□□ 0.74
U2AF1-201ENST00000291552 GALMQ96C23 342 aa19.68■□□□□ 0.74
U2AF1-201ENST00000291552 ZNF251Q9BRH9 671 aa19.68■□□□□ 0.74
U2AF1-201ENST00000291552 IGHV7-81A0A0B4J1V7 117 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 G3V318 75 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 ATP6V0E1O15342 81 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 HLA-DRB1P01911 266 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 SRMP19623 302 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 DGCR2P98153 550 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 HSD17B12Q53GQ0 312 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 KCNG3Q8TAE7 436 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 ANKRD60Q9BZ19 345 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 KLK15Q9H2R5 256 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 WSB1Q9Y6I7 421 aa19.67■□□□□ 0.74
U2AF1-201ENST00000291552 NBR2O15453 112 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 ST8SIA5O15466 376 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 RGS11O94810 467 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 NDPQ00604 133 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 C5orf64Q2M2E5 130 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 OR2AK2Q8NG84 335 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 OR5M8Q8NGP6 311 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 HDHD3Q9BSH5 251 aaPredicted RBP19.66■□□□□ 0.74
U2AF1-201ENST00000291552 OR51J1Q9H342 316 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 GNB4Q9HAV0 340 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 SORL1Q92673 2214 aa19.66■□□□□ 0.74
U2AF1-201ENST00000291552 NDUFA3O95167 84 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 MED22Q15528 200 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 ASPHD1Q5U4P2 390 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 LIPKQ5VXJ0 399 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 TMEM91Q6ZNR0 172 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 NPBQ8NG41 125 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 OR6M1Q8NGM8 313 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 NRG4Q8WWG1 115 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 IL1F10Q8WWZ1 152 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 LPAR5Q9H1C0 372 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 VCXQ9H320 206 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 PARP11Q9NR21 331 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 LRRC42Q9Y546 428 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 RYR3Q15413 4870 aa19.65■□□□□ 0.74
U2AF1-201ENST00000291552 BPNT1O95861 308 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 IGLV1-40P01703 118 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 OR5H8P0DN80 308 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 BLVRBP30043 206 aaPredicted RBP19.64■□□□□ 0.73
U2AF1-201ENST00000291552 AQP4P55087 323 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 CD69Q07108 199 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 P2RY14Q15391 338 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 RPL39P5Q59GN2 51 aa19.64■□□□□ 0.73
U2AF1-201ENST00000291552 FAM131AQ6UXB0 335 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms