RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 UQCR10Q9UDW1 63 aa9.4□□□□□ -0.91
PKNOX1-201ENST00000291547 IL19Q9UHD0 177 aa9.4□□□□□ -0.91
PKNOX1-201ENST00000291547 PRNDQ9UKY0 176 aa9.4□□□□□ -0.91
PKNOX1-201ENST00000291547 TRAV39A0A0B4J263 110 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 OOEPA6NGQ2 149 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 CYB5R3P00387 301 aaPredicted RBP9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 EMP1P54849 157 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 C1QL3Q5VWW1 255 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 OR6X1Q8NH79 312 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 TLNRD1Q9H1K6 362 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 CDC42EP3Q9UKI2 254 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 CDIPTO14735 213 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 MT-ND6P03923 174 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 SIGLEC14Q08ET2 396 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 LINC01555Q8NAE3 123 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 OR2I1PQ8NGU4 316 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 PTX4Q96A99 478 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 IGLV3-16A0A075B6K0 115 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 A8MWL6 223 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 MESTQ5EB52 335 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 SLC23A3Q6PIS1 610 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 GBGT1Q8N5D6 347 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 FAM131CQ96AQ9 280 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 VSTM2LQ96N03 204 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 OR2W1Q9Y3N9 320 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 K7EQS6 105 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 KCNAB3O43448 404 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 GZMHP20718 246 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM50BP56557 158 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM108Q6UXF1 575 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 C14orf144Q96I85 54 aa9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 MRPL13Q9BYD1 178 aaKnown RBP9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 NPDC1Q9NQX5 325 aaPredicted RBP9.39□□□□□ -0.91
PKNOX1-201ENST00000291547 ATRXP46100 2492 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 TMPRSS2O15393 492 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 CD74P04233 296 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 CT62P0C5K7 136 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 SRFP11831 508 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 SELLP14151 372 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 PMCHL1Q16048 86 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM211Q6ICI0 200 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 PCGF1Q9BSM1 259 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 TMUB1Q9BVT8 246 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM38BQ9NVV0 291 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 CES1P1Q9UKY3 287 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 GREM1O60565 184 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 TMIGD3P0DMS9 266 aaPredicted RBP9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 HOXA4Q00056 320 aaPredicted RBP9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 RNF133Q8WVZ7 376 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 HARBI1Q96MB7 349 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 SHROOM3Q8TF72 1996 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 NUBP1P53384 320 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 OR1P1Q8NH06 330 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 ASB5Q8WWX0 329 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 SOSTQ9BQB4 213 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 SAP30LQ9HAJ7 183 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 WDR81Q562E7 1941 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 NDUFB4O95168 129 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 PSG2P11465 335 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 SERF2P84101 59 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 LRRC75BQ2VPJ9 315 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 PLPPR5Q32ZL2 321 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 AMMECR1LQ6DCA0 310 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 CRIPAKQ8N1N5 446 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 ASB10Q8WXI3 467 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 ALG14Q96F25 216 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 PLA2G2FQ9BZM2 168 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 SLC26A1Q9H2B4 701 aa9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 MRPS18AQ9NVS2 196 aaKnown RBP9.38□□□□□ -0.91
PKNOX1-201ENST00000291547 DOPEY2Q9Y3R5 2298 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 TRAV38-1A0A0B4J264 116 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 IGHV5-51A0A0C4DH38 117 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 C1QL1O75973 258 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 PRSS2P07478 247 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 EFNB2P52799 333 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 SLC25A34Q6PIV7 304 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 WDR34Q96EX3 536 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 PGLYRP3Q96LB9 341 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 CLN8Q9UBY8 286 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 UNC13CQ8NB66 2214 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM265A0A087WTH1 108 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 NDUFS8O00217 210 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 MOSPD3O75425 235 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 NTN1O95631 604 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 SRD5A2P31213 254 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 LSM6P62312 80 aaKnown RBP9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 DCAF12L2Q5VW00 463 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 FLRT3Q9NZU0 649 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 RABAC1Q9UI14 185 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 DLEU1O43261 78 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 PITX3O75364 302 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 APELAP0DMC3 54 aa9.37□□□□□ -0.91
PKNOX1-201ENST00000291547 MMP16P51512 607 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms