RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 ZNF808Q8N4W9 903 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 OR5D13Q8NGL4 314 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 LURAP1Q96LR2 239 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 GAFA1Q96PS6 74 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 OR2D2Q9H210 308 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 ANKHD1Q8IWZ3 2542 aaKnown RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 MGST3O14880 152 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 ZNF16P17020 682 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 TNFSF4P23510 183 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 RPL30P62888 115 aaKnown RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 UBA52P62987 128 aaKnown RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 PAX5Q02548 391 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 FBXL19-AS1Q494R0 122 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 CXorf66Q5JRM2 361 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 DMBX1Q8NFW5 382 aa13.9□□□□□ -0.18
HIF3A-203ENST00000291300 RBPMSQ93062 196 aaKnown RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 RNASE6Q93091 150 aaKnown RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 RCL1Q9Y2P8 373 aaKnown RBP13.9□□□□□ -0.18
HIF3A-203ENST00000291300 DCHS2Q6V1P9 2916 aa13.89□□□□□ -0.19
HIF3A-203ENST00000291300 BTNL3Q6UXE8 466 aa13.89□□□□□ -0.19
HIF3A-203ENST00000291300 ABHD14BQ96IU4 210 aa13.89□□□□□ -0.19
HIF3A-203ENST00000291300 FAM210AQ96ND0 272 aa13.89□□□□□ -0.19
HIF3A-203ENST00000291300 HIVEP3Q5T1R4 2406 aa13.89□□□□□ -0.19
HIF3A-203ENST00000291300 ABCA4P78363 2273 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 ST8SIA5O15466 376 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 FCN3O75636 299 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 CD55P08174 381 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 P2RX3P56373 397 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 SRPXP78539 464 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 Q6ZRM9 215 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 TCF23Q7RTU1 214 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 MAGT1Q9H0U3 335 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 SEBOXQ9HB31 216 aaPredicted RBP13.88□□□□□ -0.19
HIF3A-203ENST00000291300 AUP1Q9Y679 476 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 TANC2Q9HCD6 1990 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 B8ZZF3 427 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 ADH4P08319 380 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 PET100P0DJ07 73 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 RPL12P30050 165 aaKnown RBP13.88□□□□□ -0.19
HIF3A-203ENST00000291300 BRWD1-AS2P59051 145 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 EIF4EBP1Q13541 118 aaPredicted RBP13.88□□□□□ -0.19
HIF3A-203ENST00000291300 OR2B11Q5JQS5 317 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 COMMD7Q86VX2 200 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 ERGIC1Q969X5 290 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 SDSLQ96GA7 329 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 TOLLIPQ9H0E2 274 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 NGBQ9NPG2 151 aa13.88□□□□□ -0.19
HIF3A-203ENST00000291300 RAMP3O60896 148 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 EPHA1P21709 976 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 POLR2GP62487 172 aaKnown RBP eCLIP13.87□□□□□ -0.19
HIF3A-203ENST00000291300 ZNF645Q8N7E2 425 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 LEAP2Q969E1 77 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 GPR146Q96CH1 333 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 AKR1E2Q96JD6 320 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 SMIM3Q9BZL3 60 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 COQ3Q9NZJ6 369 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 HRNRQ86YZ3 2850 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-203ENST00000291300 IGKV1-5P01602 117 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 CD3EP07766 207 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 VDAC1P21796 283 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 RAB14P61106 215 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 C17orf58Q2M2W7 97 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 ZNF788Q6ZQV5 615 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 SSX8Q7RTT4 187 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 ZNF561Q8N587 486 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 AGMATQ9BSE5 352 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 C11orf1Q9H5F2 150 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 SAP30LQ9HAJ7 183 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 PSG11Q9UQ72 335 aa13.87□□□□□ -0.19
HIF3A-203ENST00000291300 PROP1O75360 226 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 SERPINE2P07093 398 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 CGB3P0DN86 165 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 CGB7P0DN87 165 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 ZNF134P52741 427 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 LOXL3P58215 753 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 SMCO1Q147U7 214 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 CR1LQ2VPA4 569 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 TEX36Q5VZQ5 186 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 RPL7L1Q6DKI1 246 aaKnown RBP13.86□□□□□ -0.19
HIF3A-203ENST00000291300 CA5BP1Q8WTZ4 195 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 NINJ1Q92982 152 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 POMT1Q9Y6A1 747 aa13.86□□□□□ -0.19
HIF3A-203ENST00000291300 ST8SIA3O43173 380 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 SPINT2O43291 252 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 TNFRSF1AP19438 455 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 NUP62P37198 522 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-203ENST00000291300 CCL17Q92583 94 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 RBMXL1Q96E39 390 aaKnown RBP13.85□□□□□ -0.19
HIF3A-203ENST00000291300 SDHAF2Q9NX18 166 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 CLEC18AA5D8T8 446 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 TMEM50AO95807 157 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 WNT2P09544 360 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 RRASP10301 218 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 IRF2P14316 349 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 LOXP28300 417 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-203ENST00000291300 S100GP29377 79 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 UQCRFS1P47985 274 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 TMEM33P57088 247 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 ERVFRD-1P60508 538 aa13.85□□□□□ -0.19
HIF3A-203ENST00000291300 HTD2P86397 168 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms