RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TMEM246Q9BRR3 403 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 MFFQ9GZY8 342 aa7.11□□□□□ -1.27
PTPDC1-201ENST00000288976 A0A1W2PPE3 182 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 FOXI3A8MTJ6 420 aaPredicted RBP7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 F5H5P2 479 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 CA11O75493 328 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 LHBP01229 141 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 CHRM2P08172 466 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 ZBTB25P24278 435 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 SSTR2P30874 369 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 FCGR2CP31995 323 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 CEACAM3P40198 252 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 CSN1S1P47710 185 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 MRPS10P82664 201 aaKnown RBP7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 ZNF154Q13106 437 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 NEUROG1Q92886 237 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 Q96M66 194 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 OR2V2Q96R30 315 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 NRIP2Q9BQI9 281 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 SLC39A9Q9NUM3 307 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 COA4Q9NYJ1 87 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 PRRC2AP48634 2157 aaKnown RBP7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 HECTD1Q9ULT8 2610 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 FCGR3BO75015 233 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 CSF1P09603 554 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 KRBOX4Q5JUW0 171 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 WDR82Q6UXN9 313 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 CALHM1Q8IU99 346 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 SLC25A38Q96DW6 304 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 TSNAXQ99598 290 aaKnown RBP7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 PPP1R3EQ9H7J1 279 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 HEXA-AS1Q9H8Q6 139 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 UNKLQ9H9P5 680 aaKnown RBP7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 NAGKQ9UJ70 344 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 hADV38S2A0JD32 116 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 TMEM82A0PJX8 343 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 MGMTP16455 207 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 RFX2P48378 723 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 UNC119Q13432 240 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 MEF2DQ14814 521 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 MPV17LQ2QL34 196 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 OSR2Q8N2R0 312 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 GTF3AQ92664 365 aaKnown RBP7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 C7orf50Q9BRJ6 194 aaKnown RBP7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 ZFP57Q9NU63 452 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 INSIG2Q9Y5U4 225 aa7.1□□□□□ -1.27
PTPDC1-201ENST00000288976 CFAP46Q8IYW2 2715 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 OVOL3O00110 214 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 INHBBP09529 407 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 CT45A10P0DMU9 189 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 OR3A1P47881 315 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 RBM11P57052 281 aaKnown RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 MMDQ15546 238 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 PSMG3-AS1Q96PY0 264 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 ZNF2Q9BSG1 426 aaPredicted RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 HSF4Q9ULV5 492 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 IGHV3-35A0A0C4DH35 117 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 A0A1W2PRX2 142 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 XRCC3O43542 346 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 SNRPCP09234 159 aaKnown RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 RRASP10301 218 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 ATF4P18848 351 aaPredicted RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 CDKN1AP38936 164 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 PAX5Q02548 391 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 RHEBQ15382 184 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 VMA21Q3ZAQ7 101 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 Q3ZCU0 254 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 SPINK9Q5DT21 86 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 TEX36Q5VZQ5 186 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 OR5H6Q8NGV6 325 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 TVP23CQ96ET8 276 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 EAF1Q96JC9 268 aaPredicted RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 MTCH1Q9NZJ7 389 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 RNF7Q9UBF6 113 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 IGHV3-21A0A0B4J1V1 117 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 IGKV1-12A0A0C4DH73 117 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 SRRM5B3KS81 715 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 B3GALNT1O75752 331 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 IGKV1D-12P01611 117 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 CD8AP01732 235 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 ELK1P19419 428 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 BCL3P20749 454 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 NKX2-5P52952 324 aaPredicted RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 RPL31P62899 125 aaKnown RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 SSBP1Q04837 148 aaKnown RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 PLAC9Q5JTB6 97 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 ACSM6Q6P461 480 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 LAX1Q8IWV1 398 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 FAM213BQ8TBF2 198 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 CCL19Q99731 98 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 RASL11BQ9BPW5 248 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 CCDC32Q9BV29 185 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 LPAR5Q9H1C0 372 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 HRH4Q9H3N8 390 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 RCC2Q9P258 522 aaKnown RBP7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 V9GYH0 126 aa7.09□□□□□ -1.27
PTPDC1-201ENST00000288976 K7EPK0 472 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 CCSO14618 274 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 GSTZ1O43708 216 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms