RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ISG15P05161 165 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 BTNL3Q6UXE8 466 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 SLC35E3Q7Z769 313 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 NHLRC2Q8NBF2 726 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 OR10V1Q8NGI7 309 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 OR1L4Q8NGR5 311 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 GALMQ96C23 342 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 CHST5Q9GZS9 411 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 FZR1Q9UM11 496 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 NDUFS6O75380 124 aaKnown RBP10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 LIFP15018 202 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 UQCRFS1P47985 274 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 OR1C1Q15619 314 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 RTN4RL2Q86UN3 420 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 TUSC5Q8IXB3 177 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 OR4C12Q96R67 309 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 ZDHHC8Q9ULC8 765 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 DEFB108AA8MXU0 73 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 CEACAM6P40199 344 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 CTAG1AP78358 180 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 FHL1Q13642 323 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 ATP6V1FQ16864 119 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 ALKBH6Q3KRA9 238 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 OR1K1Q8NGR3 316 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 GPR27Q9NS67 375 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 SPTAN1Q13813 2472 aaKnown RBP10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 P2RY4P51582 365 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 ERHP84090 104 aaKnown RBP10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 FDX2Q6P4F2 183 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 SSMEM1Q8WWF3 244 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 SLC25A28Q96A46 364 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 RSG1Q9BU20 258 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 OPN3Q9H1Y3 402 aaPredicted RBP10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 CRYM-AS1A6NIL9 109 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 DHRS7CA6NNS2 312 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 TNFSF15O95150 251 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 CYB5R3P00387 301 aaPredicted RBP10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 IFI6P09912 130 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 CFHR1Q03591 330 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 TBC1D28Q2M2D7 210 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 FNDC7Q5VTL7 733 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 ATOH7Q8N100 152 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 ZNF524Q96C55 264 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 SLC26A1Q9H2B4 701 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 TTC28Q96AY4 2481 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 PRSS1P07477 247 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 BCL2P10415 239 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 PLP1P60201 277 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 SLC25A47Q6Q0C1 308 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 CISD2Q8N5K1 135 aaKnown RBP10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 ZNF837Q96EG3 531 aaPredicted RBP10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 PLXNA4Q9HCM2 1894 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 TRAV14DV4A0A0A6YYC5 116 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 IFITM10A6NMD0 228 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 SRD5A2P31213 254 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 MDH2P40926 338 aaKnown RBP10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 RND3P61587 244 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 RPL11P62913 178 aaKnown RBP10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 SPATA45Q537H7 98 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 SPNS3Q6ZMD2 512 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 RNF144BQ7Z419 303 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 BPIFA4PQ86YQ2 179 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 DEFB123Q8N688 67 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 PTX4Q96A99 478 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 MUCL1Q96DR8 90 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 OR2D2Q9H210 308 aa10.88□□□□□ -0.67
SLC6A1-201ENST00000287766 FCGR3BO75015 233 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 BRS3P32247 399 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 GNB1P62873 340 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 HES1Q14469 280 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 GAPTQ8N292 157 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 DYNLRB1Q9NP97 96 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 KIAA2026Q5HYC2 2103 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 PPYP01298 95 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 TMEM140Q9NV12 185 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 TCFL5Q9UL49 500 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 PRR19A6NJB7 356 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 RHBDL1O75783 438 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 BCL3P20749 454 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 HERPUD1Q15011 391 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 OR10AD1Q8NGE0 317 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 APOBEC3DQ96AK3 386 aaPredicted RBP10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 FER1L6-AS2Q96M78 137 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 TMEM147Q9BVK8 224 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 ZNF319Q9P2F9 582 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 ZNF107Q9UII5 783 aaPredicted RBP10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 PLXNB3Q9ULL4 1909 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 FER1L5A0AVI2 2057 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 GRIFINA4D1Z8 144 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 FAM157CP0CG43 387 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 OTX1P32242 354 aaPredicted RBP10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 BPIFB3P59826 476 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 RHOBP62745 196 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 TMEM252Q8N6L7 170 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 BCL2L2Q92843 193 aaPredicted RBP10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 NPTNQ9Y639 398 aa10.87□□□□□ -0.67
SLC6A1-201ENST00000287766 TMEM14DPA8MWL7 114 aa10.86□□□□□ -0.67
SLC6A1-201ENST00000287766 GAPDHP04406 335 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms