RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PHF1O43189 567 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF324O75467 553 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 IFNA5P01569 189 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 SMIM17P0DL12 118 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 NPPCP23582 126 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 OR3A4PP47883 348 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 CEBPDP49716 269 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF141Q15928 474 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 HLA-DRB5Q30154 266 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 ACSF3Q4G176 576 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 ASCL4Q6XD76 172 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 GTF2H5Q6ZYL4 71 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 FAM57BQ71RH2 274 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 CACNG8Q8WXS5 425 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF501Q96CX3 271 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 KCNS1Q96KK3 526 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 PHF7Q9BWX1 381 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 GEMIN7Q9H840 131 aaKnown RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 PLEKHJ1Q9NW61 149 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 CD207Q9UJ71 328 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 NXT1Q9UKK6 140 aaKnown RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 ARHGAP21Q5T5U3 1957 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 CEP290O15078 2479 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 IGKV1D-42A0A075B6H8 117 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 SAA2-SAA4A0A096LPE2 208 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 A0A1W2PPV9 198 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 GRXCR1A8MXD5 290 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 TLX3O43711 291 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 TSPAN13O95857 204 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 HNRNPA1P09651 372 aaKnown RBP eCLIP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 EN2P19622 333 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 TIMP3P35625 211 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 PLP1P60201 277 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 HSD52Q0P140 79 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 FAM53BQ14153 422 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 PET117Q6UWS5 81 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 C12orf54Q6X4T0 127 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF788Q6ZQV5 615 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 EAF1Q96JC9 268 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 LOC102725191A0A1B0GVB3 256 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 K7EQM0 130 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 SIRPB1O00241 398 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 HMGB3O15347 200 aaKnown RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 CHST1O43916 411 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 RBMXL2O75526 392 aaKnown RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 AGFG2O95081 481 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 CEBPBP17676 345 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 GUCA1AP43080 201 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 ARF3P61204 181 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 ARF1P84077 181 aaKnown RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 RPL18Q07020 188 aaKnown RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 ZIC1Q15915 447 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 CEACAM21Q3KPI0 293 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 BORCS7Q96B45 105 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 WDR61Q9GZS3 305 aaKnown RBP7.88□□□□□ -1.15
PDGFC-201ENST00000274071 TAAR3PQ9P1P4 343 aa7.88□□□□□ -1.15
PDGFC-201ENST00000274071 C7orf71A4D174 169 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 CGAP01215 116 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF17P17021 662 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 FXYD4P59646 89 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 HERV-K104P63124 156 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 PRTGQ2VWP7 1150 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 TCTEX1D4Q5JR98 221 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 C19orf35Q6ZS72 473 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 OR51T1Q8NGJ9 327 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 OR5D14Q8NGL3 314 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF721Q8TF20 911 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 OR10A2Q9H208 303 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 SLC39A9Q9NUM3 307 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 SZT2Q5T011 3432 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 GAGE12HA6NDE8 117 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 PGPEP1LA6NFU8 196 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 NXPH3O95157 252 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 BRI3O95415 125 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 BLVRBP30043 206 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-201ENST00000274071 NPBWR2P48146 333 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 PAX9P55771 341 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 ATG2AQ2TAZ0 1938 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 EMC4Q5J8M3 183 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF547Q8IVP9 402 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 RPP25LQ8N5L8 163 aaKnown RBP7.87□□□□□ -1.15
PDGFC-201ENST00000274071 ZFYVE21Q9BQ24 234 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 FOXQ1Q9C009 403 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 NPFFR1Q9GZQ6 430 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 PCNX3Q9H6A9 2034 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 MCTS1Q9ULC4 181 aaKnown RBP7.87□□□□□ -1.15
PDGFC-201ENST00000274071 C19orf53Q9UNZ5 99 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-201ENST00000274071 SCN3AQ9NY46 2000 aa7.87□□□□□ -1.15
PDGFC-201ENST00000274071 C5orf67F2Z3F1 127 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 IER3P46695 156 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 PPOXP50336 477 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 POM121L1PQ3SYA9 428 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 CD300EQ496F6 205 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-201ENST00000274071 Q56UQ5 140 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 C9orf135Q5VTT2 229 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF776Q68DI1 518 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-201ENST00000274071 BRICD5Q6PL45 260 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 CDRT4Q8N9R6 151 aa7.86□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF114Q8NC26 417 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms