RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ATRXP46100 2492 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 LRRC3CA6NJW4 275 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 DLL1O00548 723 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TNFSF12O43508 249 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SPRY1O43609 319 aaPredicted RBP13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 HPRT1P00492 218 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TFPI2P48307 235 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ERVS71-1P61550 626 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 RNASE8Q8TDE3 154 aaKnown RBP13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ELOVL1Q9BW60 279 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 NBASA2RRP1 2371 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SPTA1P02549 2419 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 VAMP5O95183 116 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CNOT4O95628 575 aaKnown RBP13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TMEM50AO95807 157 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GDF1P27539 372 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 RBX1P62877 108 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF154Q13106 437 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 OR2AE1Q8NHA4 323 aa13.64□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SHANK1Q9Y566 2161 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 FAM166BA8MTA8 275 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GFRA3O60609 400 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 IGHEP01854 428 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GZMHP20718 246 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 IDH3GP51553 393 aaPredicted RBP13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CLDN15P56746 228 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GRB2P62993 217 aaKnown RBP13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SRYQ05066 204 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PNRC1Q12796 327 aaPredicted RBP13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SNAI3Q3KNW1 292 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 AARDQ4LEZ3 155 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ABHD17BQ5VST6 288 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GGNQ86UU5 652 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 C3orf85A0A1B0GTC6 90 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 NEURL1O76050 574 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 WISP2O76076 250 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 HBE1P02100 147 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 B4GALT1P15291 398 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CD82P27701 267 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SRD5A2P31213 254 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PDLIM4P50479 330 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 RAC3P60763 192 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 C10orf128Q5T292 105 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 OR10D3Q8NH80 312 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 GPHA2Q96T91 129 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF665Q9H7R5 613 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 SDF2L1Q9HCN8 221 aa13.63□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TRDCB7Z8K6 153 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 M0R135 149 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 DHRS3O75911 302 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TNFSF10P50591 281 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 FBXW9Q5XUX1 488 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF100Q8IYN0 542 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CPEB3Q8NE35 698 aaKnown RBP13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ABHD3Q8WU67 409 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF799Q96GE5 643 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 DNAJC4Q9NNZ3 241 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 FUT9Q9Y231 359 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TLN1Q9Y490 2541 aaKnown RBP13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CDS2O95674 445 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 AADACP22760 399 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 MTCP1P56278 107 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PDCD1Q15116 288 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 NAGKQ9UJ70 344 aa13.62□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF705FA8MVS1 300 aaPredicted RBP13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PPP5D1E7EU14 171 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ADAM20O43506 726 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF705DP0CH99 300 aaPredicted RBP13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF705BP0CI00 300 aaPredicted RBP13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CD33P20138 364 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CCKARP32238 428 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 FGF8P55075 233 aaPredicted RBP13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 OR1C1Q15619 314 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TDRG1Q3Y452 100 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ETFRF1Q6IPR1 90 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 LCN15Q6UWW0 184 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ADGRG4Q8IZF6 3080 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 OR10G4Q8NGN3 311 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 MOB3AQ96BX8 217 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ACY3Q96HD9 319 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 MPPED1O15442 326 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PFN1P07737 140 aaKnown RBP13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 DEFB109BQ30KR1 87 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 ZNF695Q8IW36 515 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 CCDC71LQ8N9Z2 235 aa13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 UBE2J1Q9Y385 318 aaPredicted RBP13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 TNRC6AQ8NDV7 1962 aaKnown RBP13.61□□□□□ -0.23
MAP1LC3B-201ENST00000268607 HLA-HP01893 362 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 LCATP04180 440 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 IL6RP08887 468 aaPredicted RBP13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 BCL2P10415 239 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 DTYMKP23919 212 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 HERV-K104P61576 105 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PMP22Q01453 160 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 C9orf135Q5VTT2 229 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 AAED1Q7RTV5 226 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 FDCSPQ8NFU4 85 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 FGFBP3Q8TAT2 258 aa13.6□□□□□ -0.23
MAP1LC3B-201ENST00000268607 PP6455Q8WZ26 134 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms