RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MEX3AA1L020 520 aaKnown RBP13.55□□□□□ -0.24
TPM1-201ENST00000267996 A6NNC1 897 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 ADAM20O43506 726 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 YPEL1O60688 119 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 GOSR1O95249 250 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 SLC25A4P12235 298 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 F2RP25116 425 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 MEF2CQ06413 473 aaPredicted RBP13.55□□□□□ -0.24
TPM1-201ENST00000267996 GGNBP1Q5YKI7 109 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 TMEM65Q6PI78 240 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 LYPD2Q6UXB3 125 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 FGFRL1Q8N441 504 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 DRAM1Q8N682 238 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 NEU4Q8WWR8 484 aaPredicted RBP13.55□□□□□ -0.24
TPM1-201ENST00000267996 YPEL2Q96QA6 119 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
TPM1-201ENST00000267996 ZNF729A6NN14 1252 aaPredicted RBP13.54□□□□□ -0.24
TPM1-201ENST00000267996 CDS2O95674 445 aa13.54□□□□□ -0.24
TPM1-201ENST00000267996 IFNA21P01568 189 aa13.54□□□□□ -0.24
TPM1-201ENST00000267996 ZNF645Q8N7E2 425 aa13.54□□□□□ -0.24
TPM1-201ENST00000267996 AGMATQ9BSE5 352 aa13.54□□□□□ -0.24
TPM1-201ENST00000267996 COMMD9Q9P000 198 aa13.54□□□□□ -0.24
TPM1-201ENST00000267996 CTSZQ9UBR2 303 aa13.54□□□□□ -0.24
TPM1-201ENST00000267996 UBE2J1Q9Y385 318 aaPredicted RBP13.54□□□□□ -0.24
TPM1-201ENST00000267996 RBM7Q9Y580 266 aaKnown RBP13.54□□□□□ -0.24
TPM1-201ENST00000267996 IGHV3-43A0A0B4J1X8 118 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 hADV38S2A0JD32 116 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 ITGB1BP1O14713 200 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 IGHV2-70P01814 119 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 IGHV3-43DP0DP04 118 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 PSMB6P28072 239 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 EIF4EBP1Q13541 118 aaPredicted RBP13.53□□□□□ -0.24
TPM1-201ENST00000267996 TMEM30BQ3MIR4 351 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 MORN2Q502X0 79 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 C11orf87Q6NUJ2 197 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 MEX3BQ6ZN04 569 aaKnown RBP13.53□□□□□ -0.24
TPM1-201ENST00000267996 LYZL2Q7Z4W2 148 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 EDARADDQ8WWZ3 215 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 IL22RA2Q969J5 263 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 LINC00312Q9Y6C7 94 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 ZNF462Q96JM2 2506 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 TNFSF12O43508 249 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 NDUFB3O43676 98 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 MPC2O95563 127 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 RNF224P0DH78 156 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 NDUFB7P17568 137 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 CXCL2P19875 107 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 SELENOHQ8IZQ5 122 aaKnown RBP13.53□□□□□ -0.24
TPM1-201ENST00000267996 C5orf30Q96GV9 206 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 GON7Q9BXV9 100 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 TAS2R3Q9NYW6 316 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 LPAR3Q9UBY5 353 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 KCNS2Q9ULS6 477 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
TPM1-201ENST00000267996 KLF2Q9Y5W3 355 aaPredicted RBP13.53□□□□□ -0.24
TPM1-201ENST00000267996 USP9XQ93008 2570 aaPredicted RBP13.52□□□□□ -0.24
TPM1-201ENST00000267996 DUXBA0A1W2PPF3 345 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 RGS13O14921 159 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 LRRC10Q5BKY1 277 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 TMEM268Q5VZI3 342 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 OR52M1Q8NGK5 317 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 OR2D2Q9H210 308 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 SLA2Q9H6Q3 261 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 C19orf12Q9NSK7 152 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 GFOD1Q9NXC2 390 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 GNG12Q9UBI6 72 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 RNF150Q9ULK6 438 aa13.52□□□□□ -0.25
TPM1-201ENST00000267996 FXYD6-FXYD2A0A087WZ82 144 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 DVL1O14640 695 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 RPA2P15927 270 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 RPL31P62899 125 aaKnown RBP13.51□□□□□ -0.25
TPM1-201ENST00000267996 LTC4SQ16873 150 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 IAH1Q2TAA2 248 aaPredicted RBP13.51□□□□□ -0.25
TPM1-201ENST00000267996 SLC35G3Q8N808 338 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 RNF126Q9BV68 326 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 IDI2-AS1Q9NZ38 188 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 LAMP3Q9UQV4 416 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 FLNCQ14315 2725 aa13.51□□□□□ -0.25
TPM1-201ENST00000267996 PIGBOS1A0A0B4J2F0 54 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 RNF212BA8MTL3 300 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 ARPC5O15511 151 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 LYL1P12980 280 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 OMGP23515 440 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 LRRC37A5PQ49AS3 106 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 ZNF546Q86UE3 836 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 ZNF695Q8IW36 515 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 OR10A7Q8NGE5 316 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 OR51H1Q8NH63 302 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 RBPMSQ93062 196 aaKnown RBP13.5□□□□□ -0.25
TPM1-201ENST00000267996 HEXA-AS1Q9H8Q6 139 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 UBTD1Q9HAC8 227 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 LIN7CQ9NUP9 197 aaKnown RBP13.5□□□□□ -0.25
TPM1-201ENST00000267996 PSG11Q9UQ72 335 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 SPTAN1Q13813 2472 aaKnown RBP13.5□□□□□ -0.25
TPM1-201ENST00000267996 USF3Q68DE3 2245 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 H0YIZ8 118 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 ST8SIA5O15466 376 aa13.5□□□□□ -0.25
TPM1-201ENST00000267996 DAOP14920 347 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms