RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 OR10S1Q8NGN2 331 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 SMIM8Q96KF7 97 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 OR4C12Q96R67 309 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 C12orf49Q9H741 205 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 MMP17Q9ULZ9 603 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 COL9A2Q14055 689 aaPredicted RBP5.02□□□□□ -1.61
VCAN-201ENST00000265077 LINC00596Q86U02 117 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 TMEM167BQ9NRX6 74 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 DUSP13Q9UII6 198 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 SNURFLB1AK76 121 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 FFAR1O14842 300 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 CA11O75493 328 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 APCSP02743 223 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 POU2F2P09086 479 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 COL10A1Q03692 680 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 P2RY6Q15077 328 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 C6orf201Q7Z4U5 140 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 OR52E5Q8NH55 327 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 IGHV1-69-2A0A0G2JMI3 117 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 GDF9O60383 454 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 IGHV2-5P01817 119 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 GYPAP02724 150 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 CEACAM5P06731 702 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 ADRA2AP08913 450 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 HKR1P10072 659 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 RPS27P42677 84 aaKnown RBP5.02□□□□□ -1.61
VCAN-201ENST00000265077 TMEM255AQ5JRV8 349 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 OR13C6PQ8NH95 151 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 OR5B21A6NL26 309 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 C11orf94C9JXX5 98 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 TMEM136Q6ZRR5 245 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 ERASQ7Z444 233 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 OR1N2Q8NGR9 330 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 CACNG5Q9UF02 275 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 CDIPTO14735 213 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 PDCD6O75340 191 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 PSG1P11464 419 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 SRSF3P84103 164 aaKnown RBP5.02□□□□□ -1.61
VCAN-201ENST00000265077 OR13H1Q8NG92 308 aa5.02□□□□□ -1.61
VCAN-201ENST00000265077 HELTA6NFD8 242 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 CRYM-AS1A6NIL9 109 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 EPPINO95925 133 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 ROM1Q03395 351 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 RSPO2Q6UXX9 243 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 ZNF793Q6ZN11 406 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 ZADH2Q8N4Q0 377 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 H1FXQ92522 213 aaKnown RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 ZNF355PQ9NSJ1 428 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 FRMPD3Q5JV73 1810 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 A0A1W2PPE3 182 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 OR4A8P0C604 315 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 COL11A2P13942 1736 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 FOXF1Q12946 379 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 H1FOOQ8IZA3 346 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 FAM131CQ96AQ9 280 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 SARAFQ96BY9 339 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 HLA-GP17693 338 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 LIAT1Q6ZQX7 453 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 TMEM56Q96MV1 263 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 MRPL13Q9BYD1 178 aaKnown RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 RAMP1O60894 148 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 SRSF5Q13243 272 aaKnown RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 ZNF506Q5JVG8 444 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 RCC1LQ96I51 464 aaKnown RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 ALKBH3Q96Q83 286 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 TIMM9Q9Y5J7 89 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 TRBV9A0A0B4J1U6 114 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 GCM2O75603 506 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 LIMS1P48059 325 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 OR4X1Q8NH49 305 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 MESP1Q9BRJ9 268 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 CES1P1Q9UKY3 287 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 TRBV5-3A0A0A0MS03 114 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 SMIM17P0DL12 118 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 PAX2Q02962 417 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 RTN4RL2Q86UN3 420 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 OR5AS1Q8N127 324 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 PRDM13Q9H4Q3 707 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 PLAC1Q9HBJ0 212 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 H3BVH4 76 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 MEF2BQ02080 365 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 AMMECR1LQ6DCA0 310 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 C6orf15Q6UXA7 325 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 LINC00696Q6ZRV3 163 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 C3orf85A0A1B0GTC6 90 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 NRG2O14511 850 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 SPINK4O60575 86 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 ZGLP1P0C6A0 271 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 SLC37A1P57057 533 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 SLAQ13239 276 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 C19orf48Q6RUI8 117 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 MRGPREQ86SM8 312 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 MRGPRX1Q96LB2 322 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 P2RX4Q99571 388 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 RSPO3Q9BXY4 272 aaPredicted RBP5.01□□□□□ -1.61
VCAN-201ENST00000265077 GNB4Q9HAV0 340 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 DSCAMO60469 2012 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 A0A1B0GU03 582 aa5.01□□□□□ -1.61
VCAN-201ENST00000265077 GRIFINA4D1Z8 144 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms