RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CBR3O75828 277 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 IGKV1-13P0DP09 117 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 ZNF32P17041 273 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 CDC34P49427 236 aaPredicted RBP14.01□□□□□ -0.17
GPC1-201ENST00000264039 TCTAP57738 103 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 ABLIM2Q6H8Q1 611 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 WIPI2Q9Y4P8 454 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 CDKN1AP38936 164 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 CAPZBP47756 277 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 FNDC7Q5VTL7 733 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 LHFPL2Q6ZUX7 228 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 OR4D5Q8NGN0 318 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 ADIPOR1Q96A54 375 aa14.01□□□□□ -0.17
GPC1-201ENST00000264039 GNRH1P01148 92 aa14□□□□□ -0.17
GPC1-201ENST00000264039 SMIM15Q7Z3B0 74 aa14□□□□□ -0.17
GPC1-201ENST00000264039 TAF15Q92804 592 aaKnown RBP eCLIP14□□□□□ -0.17
GPC1-201ENST00000264039 OR6C1Q96RD1 312 aa14□□□□□ -0.17
GPC1-201ENST00000264039 ALKBH7Q9BT30 221 aaPredicted RBP14□□□□□ -0.17
GPC1-201ENST00000264039 ANGPTL4Q9BY76 406 aa14□□□□□ -0.17
GPC1-201ENST00000264039 HEYLQ9NQ87 328 aaPredicted RBP14□□□□□ -0.17
GPC1-201ENST00000264039 RAC2P15153 192 aa14□□□□□ -0.17
GPC1-201ENST00000264039 CD38P28907 300 aa14□□□□□ -0.17
GPC1-201ENST00000264039 OR5L2Q8NGL0 311 aa14□□□□□ -0.17
GPC1-201ENST00000264039 FAM131CQ96AQ9 280 aa14□□□□□ -0.17
GPC1-201ENST00000264039 SRSF10O75494 262 aaKnown RBP14□□□□□ -0.17
GPC1-201ENST00000264039 ADMP35318 185 aa14□□□□□ -0.17
GPC1-201ENST00000264039 AAED1Q7RTV5 226 aa14□□□□□ -0.17
GPC1-201ENST00000264039 BADQ92934 168 aa14□□□□□ -0.17
GPC1-201ENST00000264039 LYZL4Q96KX0 146 aa14□□□□□ -0.17
GPC1-201ENST00000264039 MRPL18Q9H0U6 180 aaKnown RBP14□□□□□ -0.17
GPC1-201ENST00000264039 NUPR1O60356 82 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 IGHV3-13P01766 116 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 IGHV3-7P01780 117 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 ATP6V1FQ16864 119 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 HLA-DRB5Q30154 266 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 FAM89BQ8N5H3 189 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 KLHDC1Q8N7A1 406 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 DERL1Q9BUN8 251 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 LRP5LA4QPB2 252 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 TSPAN2O60636 221 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 NAPSAO96009 420 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 MSX1P28360 303 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 BRS3P32247 399 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 PRR27Q6MZM9 219 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 RNASE8Q8TDE3 154 aaKnown RBP13.99□□□□□ -0.17
GPC1-201ENST00000264039 ZNF837Q96EG3 531 aaPredicted RBP13.99□□□□□ -0.17
GPC1-201ENST00000264039 NUDT16L1Q9BRJ7 211 aaKnown RBP13.99□□□□□ -0.17
GPC1-201ENST00000264039 WASHC3Q9Y3C0 194 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 CEACAM18A8MTB9 384 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 GDF9O60383 454 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 F2RP25116 425 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 YPEL5P62699 121 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 CLDN23Q96B33 292 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 WDR61Q9GZS3 305 aaKnown RBP13.99□□□□□ -0.17
GPC1-201ENST00000264039 IL36RNQ9UBH0 155 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 RPH3ALQ9UNE2 315 aa13.99□□□□□ -0.17
GPC1-201ENST00000264039 BCL3P20749 454 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 SAPCD1Q5SSQ6 148 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 HES3Q5TGS1 186 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 YRDCQ86U90 279 aaKnown RBP13.98□□□□□ -0.17
GPC1-201ENST00000264039 SSMEM1Q8WWF3 244 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 OIT3Q8WWZ8 545 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 PFN1P07737 140 aaKnown RBP13.98□□□□□ -0.17
GPC1-201ENST00000264039 CFPP27918 469 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 ATP5G3P48201 142 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 TM4SF4P48230 202 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 OR8I2Q8N0Y5 310 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 SLC35D1Q9NTN3 355 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 B3GAT1Q9P2W7 334 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 C17orf112F2Z3M2 114 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 FABP6P51161 128 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 GAB4Q2WGN9 574 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 LDLRAD2Q5SZI1 272 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 RNASEKQ6P5S7 137 aaKnown RBP13.98□□□□□ -0.17
GPC1-201ENST00000264039 TCTEX1D1Q8N7M0 179 aa13.98□□□□□ -0.17
GPC1-201ENST00000264039 TNFSF11O14788 317 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 EFEMP2O95967 443 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 RND2P52198 227 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 MAJINQ3KP22 176 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 P2RX4Q99571 388 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 LAMTOR2Q9Y2Q5 125 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 EML5Q05BV3 1969 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 CTXND1A0A1B0GTU2 59 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 SLC22A20A6NK97 555 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 HSBP1L1C9JCN9 74 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 NPIPB7O75200 414 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 PGLYRP1O75594 196 aaPredicted RBP13.97□□□□□ -0.17
GPC1-201ENST00000264039 LINC00614P0C842 121 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 FUT6P51993 359 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 FXYD3Q14802 87 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 RPP25LQ8N5L8 163 aaKnown RBP13.97□□□□□ -0.17
GPC1-201ENST00000264039 OR1L3Q8NH93 324 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 LRRC61Q9BV99 259 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 ZFAND5O76080 213 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 IL18BPO95998 194 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 G6PCP35575 357 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 CAMPP49913 170 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 OR4A47Q6IF82 309 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 MRGPRX4Q96LA9 322 aa13.97□□□□□ -0.17
GPC1-201ENST00000264039 FSCN3Q9NQT6 498 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms