RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ZNF709Q8N972 641 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 PSMF1Q92530 271 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 TBX15Q96SF7 602 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 FOXB1Q99853 325 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 TMEM147Q9BVK8 224 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 C5orf42Q9H799 3197 aa10.55□□□□□ -0.72
CHMP2B-201ENST00000263780 NPIPB11E5RHQ5 1161 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 TNFSF13O75888 250 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 IL3RAP26951 378 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 NXPH1P58417 271 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 TPPP2P59282 170 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 RIPPLY2Q5TAB7 128 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 TMEM14EPQ6UXP3 125 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 TSTD1Q8NFU3 115 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 RNF212BA8MTL3 300 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 SERPINA7P05543 415 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 B4GALT1P15291 398 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 AAED1Q7RTV5 226 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 SLC25A22Q9H936 323 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 CHODLQ9H9P2 273 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 IL17BQ9UHF5 180 aa10.54□□□□□ -0.72
CHMP2B-201ENST00000263780 A0A0J9YW62 118 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 MLNRO43193 412 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 ZIC3O60481 467 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 SCRG1O75711 98 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 SOX8P57073 446 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 TMEM183BQ1AE95 376 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 CEACAM21Q3KPI0 293 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 DEFB119Q8N690 84 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 CMTM2Q8TAZ6 248 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 PARD6AQ9NPB6 346 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 C17orf112F2Z3M2 114 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 TMPRSS2O15393 492 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 CLDN1O95832 211 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 IGKV1D-33P01593 117 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 IGKV1-33P01594 117 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 MSMO1Q15800 293 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 CYB5R2Q6BCY4 276 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 SYT13Q7L8C5 426 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 TMEM144Q7Z5S9 345 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 ZDHHC23Q8IYP9 409 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 PCED1AQ9H1Q7 454 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 TMEM106BQ9NUM4 274 aa10.53□□□□□ -0.72
CHMP2B-201ENST00000263780 C11orf94C9JXX5 98 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 F6UZH7 168 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 SOX15O60248 233 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 PAGE4O60829 102 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 PATE4P0C8F1 98 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 EDN3P14138 238 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 CHRNA7P36544 502 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 IZUMO4Q1ZYL8 232 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 FFAR4Q5NUL3 377 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 OR8G2PQ6IF36 304 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 ACSM6Q6P461 480 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 MOB1BQ7L9L4 216 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 BATF2Q8N1L9 274 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 HLA-CQ95604 372 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 THOC3Q96J01 351 aaKnown RBP10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 RBM7Q9Y580 266 aaKnown RBP10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 RTTNQ86VV8 2226 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 HSPB6O14558 160 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 LILRA1O75019 489 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 CBR3O75828 277 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 TNFSF10P50591 281 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 GPM6AP51674 278 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 TEX43Q6ZNM6 134 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 Q6ZS52 159 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 COLCA1Q6ZS62 124 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 CADM4Q8NFZ8 388 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 OR56B2PQ8NGI1 322 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 CLEC1BQ9P126 229 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 RARRES3Q9UL19 164 aa10.52□□□□□ -0.73
CHMP2B-201ENST00000263780 TRAV9-1A0A075B6T8 112 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 CARD18P57730 90 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 YPEL3P61236 119 aaPredicted RBP10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 CEACAM16Q2WEN9 425 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 TMEM249Q2WGJ8 235 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 NRN1LQ496H8 165 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 CST9LP1Q5W188 147 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 LINC01551Q86U37 167 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 OR10P1Q8NGE3 313 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 OR5A2Q8NGI9 324 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 KCNE4Q8WWG9 221 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 GMPPAQ96IJ6 420 aaPredicted RBP10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 OR6C1Q96RD1 312 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 SRXN1Q9BYN0 137 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 MTCH1Q9NZJ7 389 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 FER1L5A0AVI2 2057 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 LNP1A1A4G5 178 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 SYNGR4O95473 234 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 MRPL21Q7Z2W9 205 aaKnown RBP10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 NUFIP2Q7Z417 695 aaKnown RBP10.51□□□□□ -0.73
CHMP2B-201ENST00000263780 TMEM256Q8N2U0 113 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms