RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 MT-CO3P00414 261 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 SPNS2Q8IVW8 549 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 DNLZQ5SXM8 178 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 CBLN2Q8IUK8 224 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 A0A0U1RQV5 110 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 EPHA8P29322 1005 aaPredicted RBP15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 C19orf54Q5BKX5 351 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 RAB29O14966 203 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 OR2H1Q9GZK4 316 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 ZNF665Q9H7R5 613 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 MMP9P14780 707 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 SLC23A3Q6PIS1 610 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 MOB4Q9Y3A3 225 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 TCL1AP56279 114 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 IGF2P01344 180 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 PSG6Q00889 435 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 CD300CQ08708 224 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 LILRA6Q6PI73 481 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 ZNF519Q8TB69 540 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 CDX2Q99626 313 aaPredicted RBP15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 PLA2G2FQ9BZM2 168 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 FAM157AC9JC47 383 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 CDIPTO14735 213 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 NAAAQ02083 359 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 ZNF880Q6PDB4 577 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 PGLYRP3Q96LB9 341 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 VSIG4Q9Y279 399 aa15.29■□□□□ 0.04
NOTCH3-201ENST00000263388 NBASA2RRP1 2371 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 IER3P46695 156 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 FOXC1Q12948 553 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 DNAL4O96015 105 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 GGTLC2Q14390 218 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 SYT8Q8NBV8 401 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 CT55Q8WUE5 264 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 A0A1B0GV72 72 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 SPANXN1Q5VSR9 72 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 C16orf47Q6ZP98 133 aaPredicted RBP15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 EMP1P54849 157 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 CCDC144NLQ6NUI1 221 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 NKX2-6A6NCS4 301 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 C8orf82Q6P1X6 216 aaPredicted RBP15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 MEGF10Q96KG7 1140 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 FAM60AQ9NP50 221 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 FNDC1Q4ZHG4 1894 aaPredicted RBP15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 SOX8P57073 446 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 AKIRIN1Q9H9L7 192 aaPredicted RBP15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 KCNMB2Q9Y691 235 aa15.28■□□□□ 0.04
NOTCH3-201ENST00000263388 TMEM131Q92545 1883 aa15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 RAB9AP51151 201 aa15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 TRIP6Q15654 476 aaKnown RBP15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 NSUN5P2Q63ZY6 315 aa15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 RNF133Q8WVZ7 376 aa15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 WDR54Q9H977 334 aa15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 TRAV8-7A0A075B6U6 113 aa15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 ZNF502Q8TBZ5 544 aa15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 RAB33BQ9H082 229 aa15.27■□□□□ 0.04
NOTCH3-201ENST00000263388 H7C2G1 150 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 INO80CQ6PI98 192 aaPredicted RBP15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 LYZL2Q7Z4W2 148 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 MPDU1O75352 247 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 SPATA45Q537H7 98 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 ABCA4P78363 2273 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 PATE4P0C8F1 98 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 MMP16P51512 607 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 HIST1H4GQ99525 98 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 MIXL1Q9H2W2 232 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 OR51B2Q9Y5P1 312 aa15.27■□□□□ 0.03
NOTCH3-201ENST00000263388 MEX3AA1L020 520 aaKnown RBP15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 PMCHL1Q16048 86 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 ZNF841Q6ZN19 808 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 FLRT3Q9NZU0 649 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 RAXQ9Y2V3 346 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 C16orf82Q7Z2V1 217 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 DYNLRB2Q8TF09 96 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 APOBEC4Q8WW27 367 aaKnown RBP15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 GHITMQ9H3K2 345 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 J3QR06 171 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 RNASE1P07998 156 aaKnown RBP15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 HTN1P15515 57 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 WDFY1Q8IWB7 410 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 TMEM70Q9BUB7 260 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 LNP1A1A4G5 178 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 RPL36A-HNRNPH2H7BZ11 118 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 OR4D11Q8NGI4 311 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 OR10AC1Q8NH08 325 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 NRXN2Q9P2S2 1712 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 PAGE4O60829 102 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 IRF3Q14653 427 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 RNF7Q9UBF6 113 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 KLRB1Q12918 225 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 VAX1Q5SQQ9 334 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 TMEM136Q6ZRR5 245 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 CALHM1Q8IU99 346 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 ABHD3Q8WU67 409 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 PLAC1Q9HBJ0 212 aa15.26■□□□□ 0.03
NOTCH3-201ENST00000263388 K7N7A8 449 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 NXPH1P58417 271 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 MRPL54Q6P161 138 aaKnown RBP15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 TMEM92Q6UXU6 159 aa15.25■□□□□ 0.03
NOTCH3-201ENST00000263388 C10orf126Q8N4M7 172 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms