RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 IL2RAP01589 272 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 CBLN1P23435 193 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 RTN4RL2Q86UN3 420 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 NPEPL1Q8NDH3 523 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 RNF128Q8TEB7 428 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 KISS1RQ969F8 398 aaPredicted RBP7.28□□□□□ -1.24
LDB3-201ENST00000263066 C5orf66Q9H5L9 145 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 MOB1AQ9H8S9 216 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 PLEKHJ1Q9NW61 149 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 KLF4O43474 513 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 ZNF728P0DKX0 622 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 CCNOP22674 350 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 TSPOP30536 169 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 RBPJQ06330 500 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 AESQ08117 197 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 WDR38Q5JTN6 314 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 PLCXD3Q63HM9 321 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 NOXO1Q8NFA2 376 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 OR1B1Q8NGR6 318 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 ZC2HC1AQ96GY0 325 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 TMEM56Q96MV1 263 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 OR2D2Q9H210 308 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 PRO3102Q9H379 93 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 FLRT3Q9NZU0 649 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 ERRFI1Q9UJM3 462 aaPredicted RBP7.28□□□□□ -1.24
LDB3-201ENST00000263066 TMEM56-RWDD3S4R434 201 aa7.28□□□□□ -1.24
LDB3-201ENST00000263066 IGLV3-16A0A075B6K0 115 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 TRBV6-7A0A0A0MS04 114 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 A0A1B0GWA3 101 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 SNURFLB1AK76 121 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 CLDN1O95832 211 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 CLDN18P56856 261 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 GLIPR1L1Q6UWM5 242 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 LYZL2Q7Z4W2 148 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 FER1L6-AS1Q8NA97 138 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 SLC38A9Q8NBW4 561 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 SDF2L1Q9HCN8 221 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 PLSCR4Q9NRQ2 329 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 SLC45A2Q9UMX9 530 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 SONP18583 2426 aaKnown RBP7.27□□□□□ -1.24
LDB3-201ENST00000263066 CADP27708 2225 aa7.27□□□□□ -1.24
LDB3-201ENST00000263066 ZNF462Q96JM2 2506 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 COL4A3Q01955 1670 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 A0A1B0GX78 115 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 FAM157AC9JC47 383 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 PPIAL4DF5H284 164 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 GALR2O43603 387 aaPredicted RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 FLNBO75369 2602 aaKnown RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 RHBDL1O75783 438 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 GYPAP02724 150 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 DYNLT3P51808 116 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 PRSS53Q2L4Q9 553 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 ZNF506Q5JVG8 444 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 C12orf54Q6X4T0 127 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 ZNF793Q6ZN11 406 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 H1FOOQ8IZA3 346 aaPredicted RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 CLDN23Q96B33 292 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 FAM71F1Q96KD3 344 aaPredicted RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 GEMIN7Q9H840 131 aaKnown RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 WDR76Q9H967 626 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 PELI2Q9HAT8 420 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 BCL2L10Q9HD36 194 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 MRM2Q9UI43 246 aaKnown RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 ZGRF1Q86YA3 2104 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 OR5B21A6NL26 309 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 SNAI2O43623 268 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 NDUFB8O95169 186 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 GPR75O95800 540 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 NRASP01111 189 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 KRASP01116 189 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 TCTAP57738 103 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 PRSS8Q16651 343 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 MRGPREQ86SM8 312 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 FAM19A2Q8N3H0 131 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 OR1A1Q9P1Q5 309 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 ICAM5Q9UMF0 924 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 LRP12Q9Y561 859 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 CLEC18AA5D8T8 446 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 TRAPPC2LH3BP13 241 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 TIAF1O95411 115 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 NBEAP1P0C6P0 100 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 TAS2R30P59541 319 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 RPS4XP62701 263 aaKnown RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 CEACAM21Q3KPI0 293 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 RNASEKQ6P5S7 137 aaKnown RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 UNQ9370/PRO34162Q6UXP9 181 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 WDR5BQ86VZ2 330 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 TGIF2LYQ8IUE0 185 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 CLEC18CQ8NCF0 446 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 SAP25Q8TEE9 199 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 HEATR1Q9H583 2144 aaKnown RBP7.27□□□□□ -1.25
LDB3-201ENST00000263066 DAPP1Q9UN19 280 aa7.27□□□□□ -1.25
LDB3-201ENST00000263066 GBF1Q92538 1859 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 IGHV5-10-1A0A0J9YXX1 117 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 A0A1W2PR77 199 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 ZNHIT1O43257 154 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 ZNF735P0CB33 412 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 OPRM1P35372 400 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 SCAND1P57086 179 aa7.26□□□□□ -1.25
LDB3-201ENST00000263066 PLPPR5Q32ZL2 321 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms