RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 MTFP1Q9UDX5 166 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 TBL2Q9Y4P3 447 aaKnown RBP13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 CUBNO60494 3623 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 DGCR2P98153 550 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 SCGB2A2Q13296 93 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 ZNF79Q15937 498 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 RNASE12Q5GAN4 147 aaKnown RBP13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 CT45A1Q5HYN5 189 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 MINOS1Q5TGZ0 78 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 LYSMD2Q8IV50 215 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 OR5AP2Q8NGF4 316 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 CT45A3Q8NHU0 189 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 C17orf50Q8WW18 174 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 MINOS1-NBL1R4GNA1 71 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 A0A0U1RQK1 487 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 BUB1B-PAK6H3BSN5 160 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 SLC31A2O15432 143 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 RBBP9O75884 186 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 HTR1DP28221 377 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 RCVRNP35243 200 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 ARPC4P59998 168 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 CREB3L1Q96BA8 519 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 PARP12Q9H0J9 701 aaKnown RBP13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 RDH8Q9NYR8 311 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 DPM3Q9P2X0 92 aa13.48□□□□□ -0.25
CHCHD3-201ENST00000262570 LY6LH3BQJ8 138 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 ITGB1BP1O14713 200 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 GSTZ1O43708 216 aaPredicted RBP13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 ACTBP60709 375 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 ACTG1P63261 375 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 SSBP1Q04837 148 aaKnown RBP13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 DEFB112Q30KQ8 113 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 OR2AK2Q8NG84 335 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 MALSU1Q96EH3 234 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 GINS4Q9BRT9 223 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 AGMATQ9BSE5 352 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 ABHD14AQ9BUJ0 271 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 RBMX2Q9Y388 322 aaKnown RBP13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 FAM96BQ9Y3D0 163 aa13.47□□□□□ -0.25
CHCHD3-201ENST00000262570 LEUTXA8MZ59 168 aa13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 HLA-DMAP28067 261 aa13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 H1FOOQ8IZA3 346 aaPredicted RBP13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 OR10X1Q8NGY0 326 aa13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 EDARADDQ8WWZ3 215 aa13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 ZNF48Q96MX3 618 aaPredicted RBP13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 SLC6A7Q99884 636 aa13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 C11orf54Q9H0W9 315 aaPredicted RBP13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 PRDM13Q9H4Q3 707 aa13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 NECAP2Q9NVZ3 263 aa13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 AMMECR1Q9Y4X0 333 aaPredicted RBP13.46□□□□□ -0.25
CHCHD3-201ENST00000262570 FBP1P09467 338 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 OR5H8P0DN80 308 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 RFX2P48378 723 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 TAS2R46P59540 309 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 CDK10Q15131 360 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 PYDC2Q56P42 97 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 OVCH2Q7RTZ1 564 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 DYNAPQ8N1N2 210 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 MEGF9Q9H1U4 602 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 IFI27L2Q9H2X8 130 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 SETD2Q9BYW2 2564 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 MDFIC2A0A1B0GVS7 189 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 ST8SIA5O15466 376 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 NFYAP23511 347 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 HRH1P35367 487 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 CEACAM3P40198 252 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 OR3A3P47888 321 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 RAB7AP51149 207 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF137PP52743 207 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF45Q02386 682 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 SSX2Q16385 188 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 ODF3L1Q8IXM7 274 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 Q8N402 240 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 ST6GALNAC6Q969X2 333 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 THAP7Q9BT49 309 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 SRRQ9GZT4 340 aa13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF107Q9UII5 783 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF736B4DX44 427 aaPredicted RBP13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 LANCL1O43813 399 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 TUSC2O75896 110 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 PMP2P02689 132 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 PAX6P26367 422 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 DYRK1AQ13627 763 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 TPTE2P1Q5T6R2 138 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 LYG1Q8N1E2 194 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 MFSD4AQ8N468 514 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 OR5H2Q8NGV7 314 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 GHITMQ9H3K2 345 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 OCEL1Q9H607 264 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 AKIP1Q9NQ31 210 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 EHFQ9NZC4 300 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 OR2W1Q9Y3N9 320 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 HILPDAQ9Y5L2 63 aa13.44□□□□□ -0.26
CHCHD3-201ENST00000262570 NF1P21359 2839 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 CD3DP04234 171 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 OR8U9P0C7N5 309 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 IL3RAP26951 378 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 DIAPH2-AS1Q14236 149 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 DHRS11Q6UWP2 260 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 Q6YL49 198 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms