RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CDS2O95674 445 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 VDAC1P21796 283 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 GDF1P27539 372 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 MSX1P28360 303 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 ARF1P84077 181 aaKnown RBP11.05□□□□□ -0.64
SNX1-201ENST00000261889 KCNMB1Q16558 191 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 PMS2CLQ68D20 193 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 MCEMP1Q8IX19 187 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 OPA3Q9H6K4 179 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 DEPPQ9NTK1 212 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 NUPR1O60356 82 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 ZNF737O75373 536 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 FADS6Q8N9I5 356 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 RFESDQ8TAC1 157 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 GTF3AQ92664 365 aaKnown RBP11.05□□□□□ -0.64
SNX1-201ENST00000261889 C11orf1Q9H5F2 150 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 RNF115Q9Y4L5 304 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 ATP23Q9Y6H3 246 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 PTBP3O95758 552 aaKnown RBP11.04□□□□□ -0.64
SNX1-201ENST00000261889 G6PCP35575 357 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 TFF3Q07654 80 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 C10orf128Q5T292 105 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 NCR3LG1Q68D85 454 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 MRPL21Q7Z2W9 205 aaKnown RBP11.04□□□□□ -0.64
SNX1-201ENST00000261889 RPP25LQ8N5L8 163 aaKnown RBP11.04□□□□□ -0.64
SNX1-201ENST00000261889 A0A1B0GU03 582 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 CD300LBA8K4G0 201 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 SCGB1D1O95968 90 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 PMELP40967 661 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 FUT6P51993 359 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 ID3Q02535 119 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 TMEM256Q8N2U0 113 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 RELNP78509 3460 aa11.04□□□□□ -0.64
SNX1-201ENST00000261889 IGKV1-5P01602 117 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 HSPB1P04792 205 aaKnown RBP11.03□□□□□ -0.64
SNX1-201ENST00000261889 ECI1P42126 302 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 THBS3P49746 956 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 SSR4P51571 173 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 TDRG1Q3Y452 100 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 PSMF1Q92530 271 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 ADGRG7Q96K78 797 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 SLC39A9Q9NUM3 307 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 ADAMTS20P59510 1910 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 TRAPPC2LH3BP13 241 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 RPL36A-HNRNPH2H7BZ11 118 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 FRMD6-AS1P0C7T7 363 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 F2RP25116 425 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 SLC25A53Q5H9E4 307 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 ACSM6Q6P461 480 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 TUSC5Q8IXB3 177 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 LRTM2Q8N967 370 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 OR10J5Q8NHC4 309 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 OIT3Q8WWZ8 545 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 IL22RA2Q969J5 263 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 IMMP2LQ96T52 175 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 FZR1Q9UM11 496 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 PPIAL4AQ9Y536 164 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 PAGE4O60829 102 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 CTSSP25774 331 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 CD81P60033 236 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 C1QL4Q86Z23 238 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 UCK1Q9HA47 277 aa11.03□□□□□ -0.64
SNX1-201ENST00000261889 TRAV38-1A0A0B4J264 116 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 C9J4A7 227 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 IL18BPO95998 194 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 SP9P0CG40 484 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 GALR1P47211 349 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 RPL29P47914 159 aaKnown RBP11.02□□□□□ -0.64
SNX1-201ENST00000261889 ALKBH6Q3KRA9 238 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 RABEPKQ7Z6M1 372 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 LURAP1Q96LR2 239 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 SPIN2AQ99865 258 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 SPIN2BQ9BPZ2 258 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 GPR35Q9HC97 309 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 TTC28Q96AY4 2481 aa11.02□□□□□ -0.64
SNX1-201ENST00000261889 PRR33A8MZF0 331 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 MDH2P40926 338 aaKnown RBP11.02□□□□□ -0.65
SNX1-201ENST00000261889 FAM78BQ5VT40 261 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 OR10A7Q8NGE5 316 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
SNX1-201ENST00000261889 PILRBQ9UKJ0 227 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 PLCE1Q9P212 2302 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 H7BYZ3 331 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 SLC31A2O15432 143 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 SYNGR2O43760 224 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 IFNA10P01566 189 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 SLC35B1P78383 322 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 BAXQ07812 192 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 TEX38Q6PEX7 206 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 PCSK4Q6UW60 755 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 REC114Q7Z4M0 266 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 OR13D1Q8NGV5 346 aa11.02□□□□□ -0.65
SNX1-201ENST00000261889 PATZ1Q9HBE1 687 aaKnown RBP11.02□□□□□ -0.65
SNX1-201ENST00000261889 IGLV3-12A0A075B6K2 115 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 CLEC18AA5D8T8 446 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 TCAPO15273 167 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 GRPP07492 148 aa11.01□□□□□ -0.65
SNX1-201ENST00000261889 DSCR4P56555 118 aaPredicted RBP11.01□□□□□ -0.65
SNX1-201ENST00000261889 ZNF525Q8N782 197 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms